Protein–RNA interactions for Protein: P78363

ABCA4, Retinal-specific ATP-binding cassette transporter, humanhuman

Predictions only

Length 2,273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4P78363 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
ABCA4P78363 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
ABCA4P78363 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
ABCA4P78363 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
ABCA4P78363 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC12.92□□□□□ -0.34
ABCA4P78363 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
ABCA4P78363 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
ABCA4P78363 DDX39A-201ENST00000242776 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
ABCA4P78363 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
ABCA4P78363 AC067930.6-201ENST00000623257 4947 ntBASIC12.92□□□□□ -0.34
ABCA4P78363 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
ABCA4P78363 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
ABCA4P78363 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
ABCA4P78363 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC12.92□□□□□ -0.34
ABCA4P78363 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC12.92□□□□□ -0.34
ABCA4P78363 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
ABCA4P78363 KDSR-201ENST00000326575 1024 ntTSL 2 BASIC12.92□□□□□ -0.34
ABCA4P78363 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
ABCA4P78363 AL391832.2-201ENST00000418557 889 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
ABCA4P78363 AC007274.2-201ENST00000421675 662 ntBASIC12.92□□□□□ -0.34
ABCA4P78363 FBXO24-204ENST00000465843 957 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
ABCA4P78363 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC12.92□□□□□ -0.34
ABCA4P78363 CFL1-206ENST00000527344 962 ntTSL 2 BASIC12.92□□□□□ -0.34
ABCA4P78363 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC12.92□□□□□ -0.34
ABCA4P78363 CENPX-208ENST00000584347 799 ntTSL 2 BASIC12.92□□□□□ -0.34
ABCA4P78363 AC011491.1-203ENST00000637688 543 ntBASIC12.92□□□□□ -0.34
ABCA4P78363 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
ABCA4P78363 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
ABCA4P78363 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
ABCA4P78363 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
ABCA4P78363 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
ABCA4P78363 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
ABCA4P78363 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
ABCA4P78363 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
ABCA4P78363 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
ABCA4P78363 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC12.92□□□□□ -0.34
ABCA4P78363 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
ABCA4P78363 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
ABCA4P78363 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
ABCA4P78363 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
ABCA4P78363 STK33-217ENST00000534493 1895 ntTSL 2 BASIC12.92□□□□□ -0.34
ABCA4P78363 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
ABCA4P78363 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC12.92□□□□□ -0.34
ABCA4P78363 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC12.91□□□□□ -0.34
ABCA4P78363 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
ABCA4P78363 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
ABCA4P78363 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
ABCA4P78363 AC026904.3-201ENST00000636550 1530 ntTSL 5 BASIC12.91□□□□□ -0.34
ABCA4P78363 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC12.91□□□□□ -0.34
ABCA4P78363 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC12.91□□□□□ -0.34
ABCA4P78363 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC12.91□□□□□ -0.34
ABCA4P78363 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
ABCA4P78363 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
ABCA4P78363 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
ABCA4P78363 IGHV3-49-201ENST00000390625 439 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
ABCA4P78363 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC12.91□□□□□ -0.34
ABCA4P78363 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC12.91□□□□□ -0.34
ABCA4P78363 AC105389.3-201ENST00000508038 907 ntTSL 5 BASIC12.91□□□□□ -0.34
ABCA4P78363 ALG3P1-201ENST00000508806 1114 ntBASIC12.91□□□□□ -0.34
ABCA4P78363 AC022616.1-201ENST00000518688 554 ntBASIC12.91□□□□□ -0.34
ABCA4P78363 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
ABCA4P78363 AC009041.1-201ENST00000565401 544 ntTSL 4 BASIC12.91□□□□□ -0.34
ABCA4P78363 SYT17-208ENST00000568433 812 ntTSL 3 BASIC12.91□□□□□ -0.34
ABCA4P78363 TPGS2-209ENST00000589049 1102 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
ABCA4P78363 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC12.91□□□□□ -0.34
ABCA4P78363 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC12.91□□□□□ -0.34
ABCA4P78363 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
ABCA4P78363 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
ABCA4P78363 AL137783.1-201ENST00000623494 1896 ntBASIC12.91□□□□□ -0.34
ABCA4P78363 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
ABCA4P78363 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC12.91□□□□□ -0.34
ABCA4P78363 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
ABCA4P78363 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
ABCA4P78363 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
ABCA4P78363 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC12.91□□□□□ -0.34
ABCA4P78363 AC011270.2-201ENST00000624293 2550 ntBASIC12.91□□□□□ -0.34
ABCA4P78363 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC12.91□□□□□ -0.34
ABCA4P78363 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
ABCA4P78363 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC12.91□□□□□ -0.34
ABCA4P78363 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
ABCA4P78363 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC12.91□□□□□ -0.34
ABCA4P78363 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
ABCA4P78363 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC12.91□□□□□ -0.34
ABCA4P78363 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC12.91□□□□□ -0.34
ABCA4P78363 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
ABCA4P78363 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC12.91□□□□□ -0.34
ABCA4P78363 LINC01237-201ENST00000415434 573 ntTSL 4 BASIC12.91□□□□□ -0.34
ABCA4P78363 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC12.91□□□□□ -0.34
ABCA4P78363 AL590617.2-201ENST00000432673 917 ntTSL 3 BASIC12.91□□□□□ -0.34
ABCA4P78363 CHMP1AP1-201ENST00000445563 662 ntBASIC12.91□□□□□ -0.34
ABCA4P78363 NOC2LP1-201ENST00000450578 752 ntBASIC12.91□□□□□ -0.34
ABCA4P78363 RN7SL8P-201ENST00000461771 266 ntBASIC12.91□□□□□ -0.34
ABCA4P78363 PRKRA-211ENST00000487082 1211 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
ABCA4P78363 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC12.91□□□□□ -0.34
ABCA4P78363 AL049795.2-201ENST00000515055 667 ntTSL 2 BASIC12.91□□□□□ -0.34
ABCA4P78363 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
ABCA4P78363 RBM4B-202ENST00000524637 867 ntTSL 5 BASIC12.91□□□□□ -0.34
ABCA4P78363 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC12.91□□□□□ -0.34
ABCA4P78363 AL133499.1-201ENST00000596207 608 ntBASIC12.91□□□□□ -0.34
ABCA4P78363 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC12.91□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 57.1 ms