Protein–RNA interactions for Protein: P60608

ERVFC1-1, Endogenous retrovirus group FC1 member 1 Env polyprotein, humanhuman

Predictions only

Length 527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERVFC1-1P60608 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
ERVFC1-1P60608 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC11.78□□□□□ -0.52
ERVFC1-1P60608 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC11.78□□□□□ -0.52
ERVFC1-1P60608 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC11.78□□□□□ -0.52
ERVFC1-1P60608 FIS1-203ENST00000442303 631 ntTSL 3 BASIC11.78□□□□□ -0.52
ERVFC1-1P60608 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC11.78□□□□□ -0.52
ERVFC1-1P60608 KRT18P58-201ENST00000527480 1120 ntBASIC11.78□□□□□ -0.52
ERVFC1-1P60608 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC11.78□□□□□ -0.52
ERVFC1-1P60608 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC11.78□□□□□ -0.52
ERVFC1-1P60608 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC11.78□□□□□ -0.52
ERVFC1-1P60608 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC11.78□□□□□ -0.52
ERVFC1-1P60608 C6orf62-202ENST00000378119 4134 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
ERVFC1-1P60608 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC11.78□□□□□ -0.52
ERVFC1-1P60608 GFAP-214ENST00000588735 6538 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
ERVFC1-1P60608 GPR68-204ENST00000535815 2859 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
ERVFC1-1P60608 PDK2-203ENST00000503176 3440 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
ERVFC1-1P60608 TMPRSS13-202ENST00000445164 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
ERVFC1-1P60608 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
ERVFC1-1P60608 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC11.78□□□□□ -0.52
ERVFC1-1P60608 PASK-201ENST00000234040 4572 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
ERVFC1-1P60608 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC11.78□□□□□ -0.52
ERVFC1-1P60608 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
ERVFC1-1P60608 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC11.78□□□□□ -0.52
ERVFC1-1P60608 LPO-203ENST00000421678 2729 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
ERVFC1-1P60608 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
ERVFC1-1P60608 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
ERVFC1-1P60608 SAFB-211ENST00000592224 3014 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
ERVFC1-1P60608 TBX3-202ENST00000349155 4723 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
ERVFC1-1P60608 THSD7A-205ENST00000617773 10583 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
ERVFC1-1P60608 GBF1-201ENST00000369983 6403 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
ERVFC1-1P60608 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
ERVFC1-1P60608 BIRC5-202ENST00000350051 2630 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
ERVFC1-1P60608 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
ERVFC1-1P60608 PLD2-201ENST00000263088 3503 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
ERVFC1-1P60608 BRSK2-207ENST00000528710 3528 ntTSL 2 BASIC11.77□□□□□ -0.52
ERVFC1-1P60608 RNF216-205ENST00000425013 5639 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
ERVFC1-1P60608 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC11.77□□□□□ -0.52
ERVFC1-1P60608 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC11.77□□□□□ -0.52
ERVFC1-1P60608 KCNJ9-201ENST00000368088 4170 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
ERVFC1-1P60608 FAM120C-202ENST00000375180 8057 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.52
ERVFC1-1P60608 NCSTN-202ENST00000368063 3031 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
ERVFC1-1P60608 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC11.77□□□□□ -0.52
ERVFC1-1P60608 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC11.77□□□□□ -0.52
ERVFC1-1P60608 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.52
ERVFC1-1P60608 B3GNT5-202ENST00000460419 3368 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.53
ERVFC1-1P60608 NUP133-201ENST00000261396 5207 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
ERVFC1-1P60608 GNAS-213ENST00000371099 3709 ntTSL 5 BASIC11.77□□□□□ -0.53
ERVFC1-1P60608 RAB11FIP1-202ENST00000330843 7811 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
ERVFC1-1P60608 TRIM80P-201ENST00000455685 2848 ntBASIC11.77□□□□□ -0.53
ERVFC1-1P60608 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
ERVFC1-1P60608 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
ERVFC1-1P60608 IGFN1-201ENST00000295591 4439 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
ERVFC1-1P60608 GRIN1-202ENST00000371546 4114 ntTSL 5 BASIC11.77□□□□□ -0.53
ERVFC1-1P60608 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
ERVFC1-1P60608 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC11.77□□□□□ -0.53
ERVFC1-1P60608 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC11.77□□□□□ -0.53
ERVFC1-1P60608 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC11.77□□□□□ -0.53
ERVFC1-1P60608 AC004987.2-201ENST00000395959 1148 ntBASIC11.77□□□□□ -0.53
ERVFC1-1P60608 RAB17-203ENST00000409576 466 ntTSL 3 BASIC11.77□□□□□ -0.53
ERVFC1-1P60608 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC11.77□□□□□ -0.53
ERVFC1-1P60608 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC11.77□□□□□ -0.53
ERVFC1-1P60608 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
ERVFC1-1P60608 AC018712.1-201ENST00000455767 687 ntBASIC11.77□□□□□ -0.53
ERVFC1-1P60608 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC11.77□□□□□ -0.53
ERVFC1-1P60608 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC11.77□□□□□ -0.53
ERVFC1-1P60608 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC11.77□□□□□ -0.53
ERVFC1-1P60608 AL031432.2-201ENST00000566714 459 ntBASIC11.77□□□□□ -0.53
ERVFC1-1P60608 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC11.77□□□□□ -0.53
ERVFC1-1P60608 AL928711.1-201ENST00000570165 459 ntBASIC11.77□□□□□ -0.53
ERVFC1-1P60608 LITAF-211ENST00000572255 516 ntTSL 4 BASIC11.77□□□□□ -0.53
ERVFC1-1P60608 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC11.77□□□□□ -0.53
ERVFC1-1P60608 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC11.77□□□□□ -0.53
ERVFC1-1P60608 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC11.77□□□□□ -0.53
ERVFC1-1P60608 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC11.77□□□□□ -0.53
ERVFC1-1P60608 GPALPP1-207ENST00000611650 899 ntBASIC11.77□□□□□ -0.53
ERVFC1-1P60608 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
ERVFC1-1P60608 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC11.77□□□□□ -0.53
ERVFC1-1P60608 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC11.77□□□□□ -0.53
ERVFC1-1P60608 CLCNKA-202ENST00000375692 2581 ntAPPRIS ALT1 TSL 1 (best) BASIC11.77□□□□□ -0.53
ERVFC1-1P60608 TMEM168-201ENST00000312814 7470 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
ERVFC1-1P60608 TTC14-202ENST00000382584 2274 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
ERVFC1-1P60608 JADE1-209ENST00000511647 3560 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
ERVFC1-1P60608 C19orf44-203ENST00000594035 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
ERVFC1-1P60608 MICAL1-202ENST00000358807 3645 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
ERVFC1-1P60608 PLCD1-204ENST00000463876 2963 ntAPPRIS ALT1 TSL 2 BASIC11.77□□□□□ -0.53
ERVFC1-1P60608 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
ERVFC1-1P60608 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC11.77□□□□□ -0.53
ERVFC1-1P60608 CACNB4-210ENST00000539935 8378 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
ERVFC1-1P60608 MIR9-3HG-201ENST00000536780 4778 ntTSL 3 BASIC11.77□□□□□ -0.53
ERVFC1-1P60608 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
ERVFC1-1P60608 APCDD1L-AS1-203ENST00000427140 2092 ntTSL 2 BASIC11.77□□□□□ -0.53
ERVFC1-1P60608 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC11.77□□□□□ -0.53
ERVFC1-1P60608 GPR88-201ENST00000315033 3491 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
ERVFC1-1P60608 MPP6-202ENST00000396475 3848 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
ERVFC1-1P60608 CAMSAP3-201ENST00000160298 3889 ntAPPRIS P3 TSL 2 BASIC11.77□□□□□ -0.53
ERVFC1-1P60608 SPTBN2-209ENST00000533211 8128 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
ERVFC1-1P60608 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
ERVFC1-1P60608 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC11.77□□□□□ -0.53
ERVFC1-1P60608 AC092053.3-201ENST00000641308 4975 ntBASIC11.77□□□□□ -0.53
ERVFC1-1P60608 RAVER1-206ENST00000611074 3586 ntAPPRIS P2 TSL 5 BASIC11.77□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms