Protein–RNA interactions for Protein: P54252

ATXN3, Ataxin-3, humanhuman

Predicted RBP Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3P54252 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC15.47■□□□□ 0.07
ATXN3P54252 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
ATXN3P54252 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC15.47■□□□□ 0.07
ATXN3P54252 RHOQP1-201ENST00000555758 579 ntBASIC15.47■□□□□ 0.07
ATXN3P54252 C2orf69P2-201ENST00000562032 1123 ntBASIC15.47■□□□□ 0.07
ATXN3P54252 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC15.47■□□□□ 0.07
ATXN3P54252 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC15.47■□□□□ 0.07
ATXN3P54252 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC15.47■□□□□ 0.07
ATXN3P54252 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC15.47■□□□□ 0.07
ATXN3P54252 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC15.47■□□□□ 0.07
ATXN3P54252 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC15.47■□□□□ 0.07
ATXN3P54252 PPP1R26P4-201ENST00000619065 3527 ntBASIC15.47■□□□□ 0.07
ATXN3P54252 AC005252.2-201ENST00000624630 1141 ntBASIC15.47■□□□□ 0.07
ATXN3P54252 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
ATXN3P54252 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
ATXN3P54252 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC15.47■□□□□ 0.07
ATXN3P54252 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
ATXN3P54252 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
ATXN3P54252 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
ATXN3P54252 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC15.47■□□□□ 0.07
ATXN3P54252 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC15.47■□□□□ 0.07
ATXN3P54252 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC15.47■□□□□ 0.07
ATXN3P54252 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
ATXN3P54252 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC15.46■□□□□ 0.07
ATXN3P54252 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
ATXN3P54252 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
ATXN3P54252 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
ATXN3P54252 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
ATXN3P54252 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC15.46■□□□□ 0.07
ATXN3P54252 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
ATXN3P54252 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC15.46■□□□□ 0.07
ATXN3P54252 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
ATXN3P54252 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
ATXN3P54252 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
ATXN3P54252 MSTO2P-201ENST00000314835 1709 ntBASIC15.46■□□□□ 0.07
ATXN3P54252 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
ATXN3P54252 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC15.46■□□□□ 0.07
ATXN3P54252 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC15.46■□□□□ 0.07
ATXN3P54252 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC15.46■□□□□ 0.07
ATXN3P54252 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC15.46■□□□□ 0.07
ATXN3P54252 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
ATXN3P54252 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC15.46■□□□□ 0.07
ATXN3P54252 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC15.46■□□□□ 0.07
ATXN3P54252 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
ATXN3P54252 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
ATXN3P54252 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC15.46■□□□□ 0.07
ATXN3P54252 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
ATXN3P54252 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC15.46■□□□□ 0.07
ATXN3P54252 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
ATXN3P54252 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
ATXN3P54252 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC15.46■□□□□ 0.07
ATXN3P54252 OLR1-203ENST00000432556 950 ntTSL 2 BASIC15.46■□□□□ 0.07
ATXN3P54252 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC15.46■□□□□ 0.07
ATXN3P54252 AC104306.2-201ENST00000451877 341 ntBASIC15.46■□□□□ 0.07
ATXN3P54252 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC15.46■□□□□ 0.07
ATXN3P54252 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
ATXN3P54252 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
ATXN3P54252 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
ATXN3P54252 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC15.46■□□□□ 0.07
ATXN3P54252 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
ATXN3P54252 COG4-212ENST00000564653 590 ntTSL 5 BASIC15.46■□□□□ 0.07
ATXN3P54252 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC15.46■□□□□ 0.07
ATXN3P54252 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC15.46■□□□□ 0.07
ATXN3P54252 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
ATXN3P54252 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
ATXN3P54252 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC15.46■□□□□ 0.07
ATXN3P54252 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
ATXN3P54252 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
ATXN3P54252 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
ATXN3P54252 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
ATXN3P54252 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
ATXN3P54252 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
ATXN3P54252 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.06
ATXN3P54252 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.06
ATXN3P54252 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.06
ATXN3P54252 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
ATXN3P54252 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
ATXN3P54252 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
ATXN3P54252 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
ATXN3P54252 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
ATXN3P54252 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC15.45■□□□□ 0.06
ATXN3P54252 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
ATXN3P54252 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
ATXN3P54252 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC15.45■□□□□ 0.06
ATXN3P54252 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC15.45■□□□□ 0.06
ATXN3P54252 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
ATXN3P54252 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC15.45■□□□□ 0.06
ATXN3P54252 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
ATXN3P54252 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC15.45■□□□□ 0.06
ATXN3P54252 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC15.45■□□□□ 0.06
ATXN3P54252 ZEB1-AS1-208ENST00000607166 2503 ntBASIC15.45■□□□□ 0.06
ATXN3P54252 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
ATXN3P54252 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC15.45■□□□□ 0.06
ATXN3P54252 ZBTB45P2-201ENST00000452245 1531 ntBASIC15.45■□□□□ 0.06
ATXN3P54252 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
ATXN3P54252 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
ATXN3P54252 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
ATXN3P54252 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
ATXN3P54252 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
ATXN3P54252 BRF1-202ENST00000379932 884 ntTSL 5 BASIC15.45■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms