Protein–RNA interactions for Protein: P51148

RAB5C, Ras-related protein Rab-5C, humanhuman

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5CP51148 IL11-204ENST00000590625 1028 ntTSL 2 BASIC12.14□□□□□ -0.47
RAB5CP51148 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
RAB5CP51148 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
RAB5CP51148 AAR2-202ENST00000373932 2689 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
RAB5CP51148 FAM122B-202ENST00000343004 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
RAB5CP51148 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
RAB5CP51148 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
RAB5CP51148 MYADM-201ENST00000336967 3047 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
RAB5CP51148 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC12.14□□□□□ -0.47
RAB5CP51148 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC12.14□□□□□ -0.47
RAB5CP51148 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
RAB5CP51148 TMEM130-203ENST00000416379 2881 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
RAB5CP51148 FAM90A12P-201ENST00000519497 2375 ntBASIC12.14□□□□□ -0.47
RAB5CP51148 FAM90A24P-201ENST00000520792 2369 ntBASIC12.14□□□□□ -0.47
RAB5CP51148 DTX2P1-UPK3BP1-PMS2P11-203ENST00000636308 4646 ntTSL 5 BASIC12.14□□□□□ -0.47
RAB5CP51148 TECTA-201ENST00000264037 6468 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
RAB5CP51148 IL1RAPL2-202ENST00000372582 2985 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
RAB5CP51148 AP1B1-201ENST00000317368 3903 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
RAB5CP51148 CCDC92-208ENST00000545135 4883 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
RAB5CP51148 YLPM1-207ENST00000552421 4899 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
RAB5CP51148 CRELD1-202ENST00000383811 2696 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
RAB5CP51148 SEC23A-201ENST00000307712 4135 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
RAB5CP51148 FAM219A-207ENST00000379089 3624 ntAPPRIS ALT1 TSL 3 BASIC12.13□□□□□ -0.47
RAB5CP51148 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
RAB5CP51148 FGFRL1-201ENST00000264748 3100 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
RAB5CP51148 ARID4A-202ENST00000355431 5891 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
RAB5CP51148 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC12.13□□□□□ -0.47
RAB5CP51148 GMCL1-201ENST00000282570 4191 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
RAB5CP51148 RIPOR1-204ENST00000428437 4152 ntAPPRIS ALT2 TSL 2 BASIC12.13□□□□□ -0.47
RAB5CP51148 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
RAB5CP51148 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC12.13□□□□□ -0.47
RAB5CP51148 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC12.13□□□□□ -0.47
RAB5CP51148 SNRK-201ENST00000296088 5183 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
RAB5CP51148 ACOX1-201ENST00000293217 7514 ntAPPRIS P5 TSL 1 (best) BASIC12.13□□□□□ -0.47
RAB5CP51148 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
RAB5CP51148 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
RAB5CP51148 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC12.13□□□□□ -0.47
RAB5CP51148 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
RAB5CP51148 KIAA1217-209ENST00000430453 5962 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
RAB5CP51148 KIAA1217-211ENST00000458595 5977 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
RAB5CP51148 PLB1-205ENST00000422425 5115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
RAB5CP51148 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
RAB5CP51148 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
RAB5CP51148 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC12.13□□□□□ -0.47
RAB5CP51148 AC104457.1-201ENST00000401024 814 ntBASIC12.13□□□□□ -0.47
RAB5CP51148 ATP6V0CP3-201ENST00000417255 467 ntBASIC12.13□□□□□ -0.47
RAB5CP51148 AC136632.2-201ENST00000512891 861 ntBASIC12.13□□□□□ -0.47
RAB5CP51148 FICD-205ENST00000552758 603 ntTSL 2 BASIC12.13□□□□□ -0.47
RAB5CP51148 TK2-213ENST00000563369 882 ntTSL 5 BASIC12.13□□□□□ -0.47
RAB5CP51148 AP002414.4-201ENST00000589764 1148 ntBASIC12.13□□□□□ -0.47
RAB5CP51148 MTDHP3-201ENST00000594186 672 ntBASIC12.13□□□□□ -0.47
RAB5CP51148 AC006011.2-201ENST00000621313 1158 ntBASIC12.13□□□□□ -0.47
RAB5CP51148 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
RAB5CP51148 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
RAB5CP51148 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC12.13□□□□□ -0.47
RAB5CP51148 ATG9B-203ENST00000469530 3489 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
RAB5CP51148 PI4KB-203ENST00000368874 3934 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
RAB5CP51148 MAP3K4-203ENST00000366920 5445 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
RAB5CP51148 AC016245.1-201ENST00000570335 3204 ntTSL 2 BASIC12.13□□□□□ -0.47
RAB5CP51148 R3HDM2-204ENST00000402412 4372 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
RAB5CP51148 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
RAB5CP51148 AC018665.1-201ENST00000622927 1362 ntBASIC12.13□□□□□ -0.47
RAB5CP51148 AC244197.3-201ENST00000422081 2635 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
RAB5CP51148 AMOTL2-202ENST00000422605 4335 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
RAB5CP51148 TMC8-201ENST00000318430 4411 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
RAB5CP51148 SLC22A20-202ENST00000525437 3196 ntTSL 5 BASIC12.13□□□□□ -0.47
RAB5CP51148 SDR16C5-202ENST00000396721 2399 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
RAB5CP51148 POTEE-201ENST00000356920 4159 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
RAB5CP51148 TMEM87A-201ENST00000307216 1598 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
RAB5CP51148 C7orf65-201ENST00000408988 2911 ntTSL 2 BASIC12.13□□□□□ -0.47
RAB5CP51148 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC12.13□□□□□ -0.47
RAB5CP51148 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
RAB5CP51148 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
RAB5CP51148 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC12.13□□□□□ -0.47
RAB5CP51148 SCNN1A-215ENST00000540037 3040 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
RAB5CP51148 SNCAIP-203ENST00000379538 2588 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
RAB5CP51148 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC12.13□□□□□ -0.47
RAB5CP51148 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC12.13□□□□□ -0.47
RAB5CP51148 UBE2F-223ENST00000612130 2135 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
RAB5CP51148 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
RAB5CP51148 UQCRB-201ENST00000287022 5575 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
RAB5CP51148 AHI1-201ENST00000265602 4335 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
RAB5CP51148 RPL31-207ENST00000409711 2328 ntTSL 2 BASIC12.12□□□□□ -0.47
RAB5CP51148 BICDL2-204ENST00000573514 3519 ntTSL 2 BASIC12.12□□□□□ -0.47
RAB5CP51148 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
RAB5CP51148 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
RAB5CP51148 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
RAB5CP51148 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
RAB5CP51148 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
RAB5CP51148 CCDC18-203ENST00000401026 4552 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
RAB5CP51148 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
RAB5CP51148 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
RAB5CP51148 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC12.12□□□□□ -0.47
RAB5CP51148 RRAGD-201ENST00000359203 4042 ntTSL 2 BASIC12.12□□□□□ -0.47
RAB5CP51148 PRR26-201ENST00000381489 7250 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
RAB5CP51148 TBX3-201ENST00000257566 4208 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
RAB5CP51148 LHX6-210ENST00000559895 3587 ntTSL 2 BASIC12.12□□□□□ -0.47
RAB5CP51148 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
RAB5CP51148 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
RAB5CP51148 HSPH1-204ENST00000445273 4987 ntTSL 2 BASIC12.12□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms