Protein–RNA interactions for Protein: P50416

CPT1A, Carnitine O-palmitoyltransferase 1, liver isoform, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1AP50416 AL627231.1-201ENST00000394467 1125 ntBASIC16.48■□□□□ 0.23
CPT1AP50416 AL606491.1-201ENST00000412797 483 ntTSL 3 BASIC16.48■□□□□ 0.23
CPT1AP50416 AL139246.4-201ENST00000442305 514 ntTSL 3 BASIC16.48■□□□□ 0.23
CPT1AP50416 AC105389.3-201ENST00000508038 907 ntTSL 5 BASIC16.48■□□□□ 0.23
CPT1AP50416 TOMM7-207ENST00000621567 241 ntAPPRIS ALT1 TSL 5 BASIC16.48■□□□□ 0.23
CPT1AP50416 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CPT1AP50416 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC16.48■□□□□ 0.23
CPT1AP50416 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC16.48■□□□□ 0.23
CPT1AP50416 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CPT1AP50416 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CPT1AP50416 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CPT1AP50416 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
CPT1AP50416 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CPT1AP50416 EPHX1-202ENST00000366837 1780 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CPT1AP50416 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC16.48■□□□□ 0.23
CPT1AP50416 ERGIC3-203ENST00000357394 1357 ntAPPRIS P4 TSL 2 BASIC16.48■□□□□ 0.23
CPT1AP50416 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC16.48■□□□□ 0.23
CPT1AP50416 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC16.48■□□□□ 0.23
CPT1AP50416 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CPT1AP50416 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC16.48■□□□□ 0.23
CPT1AP50416 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CPT1AP50416 OXNAD1-202ENST00000435829 1643 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
CPT1AP50416 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC16.48■□□□□ 0.23
CPT1AP50416 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CPT1AP50416 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CPT1AP50416 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CPT1AP50416 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC16.48■□□□□ 0.23
CPT1AP50416 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CPT1AP50416 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
CPT1AP50416 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
CPT1AP50416 HIGD1A-202ENST00000418900 1322 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
CPT1AP50416 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CPT1AP50416 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CPT1AP50416 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC16.47■□□□□ 0.23
CPT1AP50416 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
CPT1AP50416 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CPT1AP50416 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CPT1AP50416 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC16.47■□□□□ 0.23
CPT1AP50416 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CPT1AP50416 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
CPT1AP50416 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CPT1AP50416 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CPT1AP50416 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC16.47■□□□□ 0.23
CPT1AP50416 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CPT1AP50416 RPS9-201ENST00000302907 829 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CPT1AP50416 MRPS22-201ENST00000310776 1120 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CPT1AP50416 FAM3B-203ENST00000398647 864 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CPT1AP50416 FAM3B-204ENST00000398652 1125 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CPT1AP50416 TMEM219-202ENST00000414689 1024 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CPT1AP50416 AC098935.1-201ENST00000446057 611 ntBASIC16.47■□□□□ 0.23
CPT1AP50416 EFCAB10-201ENST00000460135 717 ntTSL 2 BASIC16.47■□□□□ 0.23
CPT1AP50416 RN7SL67P-201ENST00000492147 296 ntBASIC16.47■□□□□ 0.23
CPT1AP50416 SMIM23-202ENST00000523047 573 ntAPPRIS P5 TSL 2 BASIC16.47■□□□□ 0.23
CPT1AP50416 BHMT-206ENST00000524080 1207 ntTSL 2 BASIC16.47■□□□□ 0.23
CPT1AP50416 TMEM219-204ENST00000566848 1292 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CPT1AP50416 AC026803.1-201ENST00000569130 274 ntBASIC16.47■□□□□ 0.23
CPT1AP50416 ZNF286A-219ENST00000585194 607 ntTSL 4 BASIC16.47■□□□□ 0.23
CPT1AP50416 AC103810.10-201ENST00000606504 343 ntBASIC16.47■□□□□ 0.23
CPT1AP50416 AC073352.2-201ENST00000609385 439 ntBASIC16.47■□□□□ 0.23
CPT1AP50416 CUTA-215ENST00000611509 1199 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
CPT1AP50416 MVK-217ENST00000639206 367 ntTSL 5 BASIC16.47■□□□□ 0.23
CPT1AP50416 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
CPT1AP50416 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CPT1AP50416 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC16.47■□□□□ 0.23
CPT1AP50416 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CPT1AP50416 CCDC51-202ENST00000412398 1385 ntTSL 2 BASIC16.47■□□□□ 0.23
CPT1AP50416 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CPT1AP50416 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC16.47■□□□□ 0.23
CPT1AP50416 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CPT1AP50416 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CPT1AP50416 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CPT1AP50416 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC16.47■□□□□ 0.23
CPT1AP50416 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
CPT1AP50416 CYP4F23P-201ENST00000593402 1579 ntBASIC16.47■□□□□ 0.23
CPT1AP50416 FLJ16779-201ENST00000612722 7638 ntBASIC16.47■□□□□ 0.23
CPT1AP50416 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
CPT1AP50416 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CPT1AP50416 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CPT1AP50416 DNASE1L2-204ENST00000567494 1301 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CPT1AP50416 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CPT1AP50416 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CPT1AP50416 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC16.46■□□□□ 0.23
CPT1AP50416 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
CPT1AP50416 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
CPT1AP50416 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CPT1AP50416 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
CPT1AP50416 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CPT1AP50416 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CPT1AP50416 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC16.46■□□□□ 0.23
CPT1AP50416 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CPT1AP50416 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
CPT1AP50416 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CPT1AP50416 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CPT1AP50416 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CPT1AP50416 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
CPT1AP50416 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CPT1AP50416 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
CPT1AP50416 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CPT1AP50416 TPM1-202ENST00000288398 1295 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CPT1AP50416 CMTM5-203ENST00000359320 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms