Protein–RNA interactions for Protein: P37840

SNCA, Alpha-synuclein, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAP37840 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC12.45□□□□□ -0.42
SNCAP37840 CAD-202ENST00000403525 6900 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
SNCAP37840 SYNPO-205ENST00000522122 5098 ntAPPRIS ALT2 TSL 2 BASIC12.45□□□□□ -0.42
SNCAP37840 NRIP3-201ENST00000309166 3809 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
SNCAP37840 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
SNCAP37840 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC12.45□□□□□ -0.42
SNCAP37840 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
SNCAP37840 AC015909.5-201ENST00000624336 2266 ntBASIC12.45□□□□□ -0.42
SNCAP37840 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
SNCAP37840 IL13RA1-202ENST00000371666 4036 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
SNCAP37840 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC12.45□□□□□ -0.42
SNCAP37840 TAS1R3-201ENST00000339381 3433 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
SNCAP37840 MIRLET7BHG-201ENST00000360737 4560 ntTSL 2 BASIC12.45□□□□□ -0.42
SNCAP37840 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
SNCAP37840 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC12.45□□□□□ -0.42
SNCAP37840 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
SNCAP37840 ITPR2-202ENST00000381340 11405 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
SNCAP37840 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC12.45□□□□□ -0.42
SNCAP37840 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
SNCAP37840 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC12.45□□□□□ -0.42
SNCAP37840 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC12.45□□□□□ -0.42
SNCAP37840 USP51-201ENST00000500968 4407 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
SNCAP37840 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
SNCAP37840 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
SNCAP37840 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
SNCAP37840 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
SNCAP37840 HTR5BP-201ENST00000430851 1154 ntBASIC12.45□□□□□ -0.42
SNCAP37840 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC12.45□□□□□ -0.42
SNCAP37840 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC12.45□□□□□ -0.42
SNCAP37840 AC069335.1-201ENST00000489972 472 ntBASIC12.45□□□□□ -0.42
SNCAP37840 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC12.45□□□□□ -0.42
SNCAP37840 KRT18P58-201ENST00000527480 1120 ntBASIC12.45□□□□□ -0.42
SNCAP37840 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC12.45□□□□□ -0.42
SNCAP37840 AC003101.2-201ENST00000612557 442 ntBASIC12.45□□□□□ -0.42
SNCAP37840 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
SNCAP37840 NME4-212ENST00000621774 904 ntTSL 3 BASIC12.45□□□□□ -0.42
SNCAP37840 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC12.45□□□□□ -0.42
SNCAP37840 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
SNCAP37840 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
SNCAP37840 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC12.45□□□□□ -0.42
SNCAP37840 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC12.45□□□□□ -0.42
SNCAP37840 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC12.45□□□□□ -0.42
SNCAP37840 SMIM14-201ENST00000295958 6483 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
SNCAP37840 SAMD15-201ENST00000216471 2564 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
SNCAP37840 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
SNCAP37840 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
SNCAP37840 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
SNCAP37840 USP4-203ENST00000415188 1454 ntTSL 3 BASIC12.45□□□□□ -0.42
SNCAP37840 TBC1D9B-208ENST00000519746 2755 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
SNCAP37840 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC12.45□□□□□ -0.42
SNCAP37840 SPOCD1-201ENST00000257100 2472 ntAPPRIS ALT2 TSL 2 BASIC12.45□□□□□ -0.42
SNCAP37840 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
SNCAP37840 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
SNCAP37840 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
SNCAP37840 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
SNCAP37840 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
SNCAP37840 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
SNCAP37840 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC12.44□□□□□ -0.42
SNCAP37840 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SNCAP37840 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
SNCAP37840 FAM213A-205ENST00000606162 5859 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SNCAP37840 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SNCAP37840 NAPEPLD-201ENST00000341533 4972 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SNCAP37840 ARHGAP10-201ENST00000336498 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SNCAP37840 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SNCAP37840 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SNCAP37840 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC12.44□□□□□ -0.42
SNCAP37840 ZNF862-201ENST00000223210 6950 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
SNCAP37840 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
SNCAP37840 AC130686.1-201ENST00000622936 2466 ntBASIC12.44□□□□□ -0.42
SNCAP37840 ACKR3-201ENST00000272928 2203 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
SNCAP37840 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
SNCAP37840 GSE1-202ENST00000393243 7140 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
SNCAP37840 PIK3R5-216ENST00000584803 2653 ntAPPRIS ALT1 TSL 5 BASIC12.44□□□□□ -0.42
SNCAP37840 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SNCAP37840 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
SNCAP37840 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SNCAP37840 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SNCAP37840 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
SNCAP37840 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SNCAP37840 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
SNCAP37840 PMP22-202ENST00000395936 816 ntTSL 3 BASIC12.44□□□□□ -0.42
SNCAP37840 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC12.44□□□□□ -0.42
SNCAP37840 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC12.44□□□□□ -0.42
SNCAP37840 KRT18P32-201ENST00000424695 1287 ntBASIC12.44□□□□□ -0.42
SNCAP37840 AC004832.2-201ENST00000426397 482 ntBASIC12.44□□□□□ -0.42
SNCAP37840 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC12.44□□□□□ -0.42
SNCAP37840 CEND1P1-201ENST00000451006 455 ntBASIC12.44□□□□□ -0.42
SNCAP37840 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC12.44□□□□□ -0.42
SNCAP37840 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC12.44□□□□□ -0.42
SNCAP37840 ALG1L8P-201ENST00000533887 760 ntBASIC12.44□□□□□ -0.42
SNCAP37840 CCND1-203ENST00000536559 553 ntTSL 3 BASIC12.44□□□□□ -0.42
SNCAP37840 AC105021.1-202ENST00000570572 669 ntBASIC12.44□□□□□ -0.42
SNCAP37840 AC018529.1-201ENST00000613063 361 ntBASIC12.44□□□□□ -0.42
SNCAP37840 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
SNCAP37840 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SNCAP37840 ASAP1-201ENST00000357668 6344 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
SNCAP37840 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC12.44□□□□□ -0.42
SNCAP37840 WDR66-201ENST00000288912 4467 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
SNCAP37840 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC12.44□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 56.1 ms