Protein–RNA interactions for Protein: P35790

CHKA, Choline kinase alpha, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKAP35790 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CHKAP35790 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
CHKAP35790 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CHKAP35790 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
CHKAP35790 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
CHKAP35790 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC15.89■□□□□ 0.13
CHKAP35790 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC15.89■□□□□ 0.13
CHKAP35790 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CHKAP35790 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC15.89■□□□□ 0.13
CHKAP35790 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC15.89■□□□□ 0.13
CHKAP35790 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CHKAP35790 FTH1P14-201ENST00000482930 551 ntBASIC15.89■□□□□ 0.13
CHKAP35790 AC119751.2-201ENST00000504529 210 ntBASIC15.89■□□□□ 0.13
CHKAP35790 AC106760.1-201ENST00000508690 800 ntBASIC15.89■□□□□ 0.13
CHKAP35790 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC15.89■□□□□ 0.13
CHKAP35790 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC15.89■□□□□ 0.13
CHKAP35790 AP000812.2-201ENST00000538934 718 ntBASIC15.89■□□□□ 0.13
CHKAP35790 AC079316.1-201ENST00000548397 411 ntBASIC15.89■□□□□ 0.13
CHKAP35790 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC15.89■□□□□ 0.13
CHKAP35790 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC15.89■□□□□ 0.13
CHKAP35790 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CHKAP35790 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CHKAP35790 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
CHKAP35790 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CHKAP35790 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC15.89■□□□□ 0.13
CHKAP35790 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CHKAP35790 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CHKAP35790 AC018529.2-202ENST00000611482 3087 ntBASIC15.89■□□□□ 0.13
CHKAP35790 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CHKAP35790 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CHKAP35790 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
CHKAP35790 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC15.89■□□□□ 0.13
CHKAP35790 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
CHKAP35790 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CHKAP35790 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
CHKAP35790 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC15.89■□□□□ 0.13
CHKAP35790 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC15.89■□□□□ 0.13
CHKAP35790 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CHKAP35790 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
CHKAP35790 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC15.89■□□□□ 0.13
CHKAP35790 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CHKAP35790 SLC9A7P1-202ENST00000556476 2239 ntBASIC15.88■□□□□ 0.13
CHKAP35790 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
CHKAP35790 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC15.88■□□□□ 0.13
CHKAP35790 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CHKAP35790 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC15.88■□□□□ 0.13
CHKAP35790 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
CHKAP35790 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC15.88■□□□□ 0.13
CHKAP35790 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CHKAP35790 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CHKAP35790 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CHKAP35790 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC15.88■□□□□ 0.13
CHKAP35790 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
CHKAP35790 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CHKAP35790 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC15.88■□□□□ 0.13
CHKAP35790 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CHKAP35790 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
CHKAP35790 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CHKAP35790 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CHKAP35790 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
CHKAP35790 STX1A-203ENST00000395155 783 ntTSL 2 BASIC15.88■□□□□ 0.13
CHKAP35790 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
CHKAP35790 GHSR-202ENST00000427970 912 ntBASIC15.88■□□□□ 0.13
CHKAP35790 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC15.88■□□□□ 0.13
CHKAP35790 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CHKAP35790 AC007274.1-201ENST00000439805 662 ntBASIC15.88■□□□□ 0.13
CHKAP35790 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC15.88■□□□□ 0.13
CHKAP35790 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC15.88■□□□□ 0.13
CHKAP35790 MIR4259-201ENST00000584466 101 ntBASIC15.88■□□□□ 0.13
CHKAP35790 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC15.88■□□□□ 0.13
CHKAP35790 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC15.88■□□□□ 0.13
CHKAP35790 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC15.88■□□□□ 0.13
CHKAP35790 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CHKAP35790 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC15.88■□□□□ 0.13
CHKAP35790 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CHKAP35790 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CHKAP35790 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
CHKAP35790 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
CHKAP35790 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
CHKAP35790 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CHKAP35790 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CHKAP35790 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CHKAP35790 KRT8P35-201ENST00000483942 1338 ntBASIC15.88■□□□□ 0.13
CHKAP35790 AC093525.8-201ENST00000624099 1342 ntBASIC15.88■□□□□ 0.13
CHKAP35790 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC15.88■□□□□ 0.13
CHKAP35790 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CHKAP35790 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CHKAP35790 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CHKAP35790 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
CHKAP35790 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
CHKAP35790 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CHKAP35790 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC15.87■□□□□ 0.13
CHKAP35790 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CHKAP35790 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CHKAP35790 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
CHKAP35790 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CHKAP35790 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC15.87■□□□□ 0.13
CHKAP35790 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
CHKAP35790 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CHKAP35790 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 60.4 ms