Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
HOXC12P31275 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
HOXC12P31275 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC13.4□□□□□ -0.26
HOXC12P31275 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC13.4□□□□□ -0.26
HOXC12P31275 AL158070.2-201ENST00000623713 1621 ntBASIC13.4□□□□□ -0.26
HOXC12P31275 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
HOXC12P31275 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC13.4□□□□□ -0.26
HOXC12P31275 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
HOXC12P31275 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
HOXC12P31275 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
HOXC12P31275 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
HOXC12P31275 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
HOXC12P31275 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC13.4□□□□□ -0.26
HOXC12P31275 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
HOXC12P31275 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
HOXC12P31275 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
HOXC12P31275 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
HOXC12P31275 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
HOXC12P31275 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
HOXC12P31275 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
HOXC12P31275 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
HOXC12P31275 GHSR-202ENST00000427970 912 ntBASIC13.4□□□□□ -0.26
HOXC12P31275 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
HOXC12P31275 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
HOXC12P31275 AC006033.1-201ENST00000440505 426 ntBASIC13.4□□□□□ -0.26
HOXC12P31275 RPL13AP20-201ENST00000459725 609 ntBASIC13.4□□□□□ -0.26
HOXC12P31275 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC13.4□□□□□ -0.26
HOXC12P31275 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC13.4□□□□□ -0.26
HOXC12P31275 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC13.4□□□□□ -0.26
HOXC12P31275 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC13.4□□□□□ -0.26
HOXC12P31275 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC13.4□□□□□ -0.26
HOXC12P31275 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC13.4□□□□□ -0.26
HOXC12P31275 DUX4L45-201ENST00000566406 1057 ntBASIC13.4□□□□□ -0.26
HOXC12P31275 RN7SL560P-201ENST00000577943 264 ntBASIC13.4□□□□□ -0.26
HOXC12P31275 LGALS9C-215ENST00000584941 1104 ntTSL 5 BASIC13.4□□□□□ -0.26
HOXC12P31275 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
HOXC12P31275 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC13.4□□□□□ -0.26
HOXC12P31275 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC13.4□□□□□ -0.26
HOXC12P31275 POU2F2-202ENST00000389341 6901 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
HOXC12P31275 CICP11-201ENST00000434745 2827 ntBASIC13.4□□□□□ -0.26
HOXC12P31275 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
HOXC12P31275 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
HOXC12P31275 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
HOXC12P31275 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
HOXC12P31275 ALX4-201ENST00000329255 5750 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
HOXC12P31275 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
HOXC12P31275 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC13.4□□□□□ -0.26
HOXC12P31275 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
HOXC12P31275 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
HOXC12P31275 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC13.4□□□□□ -0.26
HOXC12P31275 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
HOXC12P31275 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
HOXC12P31275 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC13.4□□□□□ -0.26
HOXC12P31275 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
HOXC12P31275 AC136621.1-201ENST00000624017 2304 ntBASIC13.4□□□□□ -0.26
HOXC12P31275 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
HOXC12P31275 FANCC-201ENST00000289081 4585 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
HOXC12P31275 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
HOXC12P31275 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC13.4□□□□□ -0.26
HOXC12P31275 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
HOXC12P31275 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
HOXC12P31275 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC13.4□□□□□ -0.27
HOXC12P31275 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC13.4□□□□□ -0.27
HOXC12P31275 CACNA1G-232ENST00000515411 6960 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.27
HOXC12P31275 CACNA1G-233ENST00000515765 6981 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.27
HOXC12P31275 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC13.39□□□□□ -0.27
HOXC12P31275 Z83844.1-201ENST00000455236 4904 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
HOXC12P31275 SSR4P1-203ENST00000599569 2260 ntBASIC13.39□□□□□ -0.27
HOXC12P31275 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
HOXC12P31275 ANKRD11-201ENST00000301030 9301 ntAPPRIS P2 TSL 5 BASIC13.39□□□□□ -0.27
HOXC12P31275 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
HOXC12P31275 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
HOXC12P31275 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
HOXC12P31275 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
HOXC12P31275 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC13.39□□□□□ -0.27
HOXC12P31275 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC13.39□□□□□ -0.27
HOXC12P31275 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
HOXC12P31275 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
HOXC12P31275 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC13.39□□□□□ -0.27
HOXC12P31275 KIAA0513-202ENST00000538274 7381 ntTSL 2 BASIC13.39□□□□□ -0.27
HOXC12P31275 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
HOXC12P31275 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
HOXC12P31275 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
HOXC12P31275 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
HOXC12P31275 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
HOXC12P31275 RNU1-114P-201ENST00000365297 166 ntBASIC13.39□□□□□ -0.27
HOXC12P31275 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
HOXC12P31275 KLF2P2-201ENST00000416807 1039 ntBASIC13.39□□□□□ -0.27
HOXC12P31275 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
HOXC12P31275 AC016694.1-201ENST00000434179 700 ntBASIC13.39□□□□□ -0.27
HOXC12P31275 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
HOXC12P31275 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
HOXC12P31275 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC13.39□□□□□ -0.27
HOXC12P31275 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
HOXC12P31275 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC13.39□□□□□ -0.27
HOXC12P31275 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC13.39□□□□□ -0.27
HOXC12P31275 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC13.39□□□□□ -0.27
HOXC12P31275 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC13.39□□□□□ -0.27
HOXC12P31275 COG4-212ENST00000564653 590 ntTSL 5 BASIC13.39□□□□□ -0.27
HOXC12P31275 AC091271.1-201ENST00000611877 1162 ntBASIC13.39□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms