Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
COL8A2P25067 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC12.71□□□□□ -0.38
COL8A2P25067 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC12.71□□□□□ -0.38
COL8A2P25067 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
COL8A2P25067 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
COL8A2P25067 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC12.71□□□□□ -0.38
COL8A2P25067 KRT8P4-201ENST00000509735 1454 ntBASIC12.71□□□□□ -0.38
COL8A2P25067 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
COL8A2P25067 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC12.71□□□□□ -0.38
COL8A2P25067 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
COL8A2P25067 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
COL8A2P25067 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
COL8A2P25067 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
COL8A2P25067 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
COL8A2P25067 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
COL8A2P25067 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC12.7□□□□□ -0.38
COL8A2P25067 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
COL8A2P25067 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
COL8A2P25067 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
COL8A2P25067 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC12.7□□□□□ -0.38
COL8A2P25067 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
COL8A2P25067 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
COL8A2P25067 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
COL8A2P25067 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
COL8A2P25067 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC12.7□□□□□ -0.38
COL8A2P25067 FKBP4P6-201ENST00000457486 1332 ntBASIC12.7□□□□□ -0.38
COL8A2P25067 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
COL8A2P25067 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
COL8A2P25067 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
COL8A2P25067 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
COL8A2P25067 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
COL8A2P25067 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
COL8A2P25067 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC12.7□□□□□ -0.38
COL8A2P25067 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
COL8A2P25067 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
COL8A2P25067 MTX1P1-201ENST00000440904 838 ntBASIC12.7□□□□□ -0.38
COL8A2P25067 AL591846.1-201ENST00000451736 433 ntBASIC12.7□□□□□ -0.38
COL8A2P25067 AC104306.2-201ENST00000451877 341 ntBASIC12.7□□□□□ -0.38
COL8A2P25067 RPSAP36-202ENST00000494591 1261 ntBASIC12.7□□□□□ -0.38
COL8A2P25067 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC12.7□□□□□ -0.38
COL8A2P25067 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
COL8A2P25067 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC12.7□□□□□ -0.38
COL8A2P25067 AP003171.2-201ENST00000528208 925 ntBASIC12.7□□□□□ -0.38
COL8A2P25067 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
COL8A2P25067 AC106820.3-201ENST00000561653 397 ntBASIC12.7□□□□□ -0.38
COL8A2P25067 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
COL8A2P25067 PPY2P-201ENST00000582808 702 ntBASIC12.7□□□□□ -0.38
COL8A2P25067 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
COL8A2P25067 EEF1DP1-201ENST00000585891 896 ntBASIC12.7□□□□□ -0.38
COL8A2P25067 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
COL8A2P25067 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
COL8A2P25067 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
COL8A2P25067 AC073413.1-201ENST00000603927 732 ntBASIC12.7□□□□□ -0.38
COL8A2P25067 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC12.7□□□□□ -0.38
COL8A2P25067 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC12.7□□□□□ -0.38
COL8A2P25067 PRKN-211ENST00000615065 261 ntTSL 5 BASIC12.7□□□□□ -0.38
COL8A2P25067 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
COL8A2P25067 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC12.7□□□□□ -0.38
COL8A2P25067 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC12.7□□□□□ -0.38
COL8A2P25067 AC126365.1-201ENST00000578585 1514 ntBASIC12.7□□□□□ -0.38
COL8A2P25067 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
COL8A2P25067 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
COL8A2P25067 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
COL8A2P25067 NORAD-201ENST00000565493 5339 ntBASIC12.7□□□□□ -0.38
COL8A2P25067 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
COL8A2P25067 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC12.7□□□□□ -0.38
COL8A2P25067 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC12.7□□□□□ -0.38
COL8A2P25067 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC12.7□□□□□ -0.38
COL8A2P25067 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
COL8A2P25067 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
COL8A2P25067 AL023775.1-201ENST00000454907 1746 ntBASIC12.7□□□□□ -0.38
COL8A2P25067 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
COL8A2P25067 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
COL8A2P25067 GSN-215ENST00000545652 2428 ntTSL 2 BASIC12.7□□□□□ -0.38
COL8A2P25067 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
COL8A2P25067 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC12.7□□□□□ -0.38
COL8A2P25067 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
COL8A2P25067 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
COL8A2P25067 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
COL8A2P25067 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC12.7□□□□□ -0.38
COL8A2P25067 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
COL8A2P25067 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
COL8A2P25067 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
COL8A2P25067 AC023157.3-201ENST00000619086 2088 ntBASIC12.69□□□□□ -0.38
COL8A2P25067 AC117489.1-201ENST00000625169 3217 ntBASIC12.69□□□□□ -0.38
COL8A2P25067 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC12.69□□□□□ -0.38
COL8A2P25067 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
COL8A2P25067 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
COL8A2P25067 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
COL8A2P25067 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC12.69□□□□□ -0.38
COL8A2P25067 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
COL8A2P25067 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC12.69□□□□□ -0.38
COL8A2P25067 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
COL8A2P25067 AC067930.6-201ENST00000623257 4947 ntBASIC12.69□□□□□ -0.38
COL8A2P25067 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC12.69□□□□□ -0.38
COL8A2P25067 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC12.69□□□□□ -0.38
COL8A2P25067 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC12.69□□□□□ -0.38
COL8A2P25067 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC12.69□□□□□ -0.38
COL8A2P25067 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
COL8A2P25067 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 60.6 ms