Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 AC138466.3-201ENST00000619983 221 ntBASIC17.67■□□□□ 0.42
TOP1P11387 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TOP1P11387 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
TOP1P11387 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC17.67■□□□□ 0.42
TOP1P11387 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TOP1P11387 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TOP1P11387 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC17.67■□□□□ 0.42
TOP1P11387 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TOP1P11387 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC17.67■□□□□ 0.42
TOP1P11387 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TOP1P11387 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
TOP1P11387 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TOP1P11387 TUBB1P2-201ENST00000422712 1306 ntBASIC17.67■□□□□ 0.42
TOP1P11387 TUBB1P1-201ENST00000503144 1300 ntBASIC17.67■□□□□ 0.42
TOP1P11387 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TOP1P11387 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
TOP1P11387 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TOP1P11387 RER1-203ENST00000378513 3000 ntTSL 3 BASIC17.66■□□□□ 0.42
TOP1P11387 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
TOP1P11387 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TOP1P11387 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC17.66■□□□□ 0.42
TOP1P11387 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TOP1P11387 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TOP1P11387 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TOP1P11387 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
TOP1P11387 ANKRD30BP2-201ENST00000435744 1610 ntBASIC17.66■□□□□ 0.42
TOP1P11387 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC17.66■□□□□ 0.42
TOP1P11387 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC17.66■□□□□ 0.42
TOP1P11387 RPF1-202ENST00000370656 724 ntTSL 2 BASIC17.66■□□□□ 0.42
TOP1P11387 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC17.66■□□□□ 0.42
TOP1P11387 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TOP1P11387 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TOP1P11387 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC17.66■□□□□ 0.42
TOP1P11387 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
TOP1P11387 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC17.66■□□□□ 0.42
TOP1P11387 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC17.66■□□□□ 0.42
TOP1P11387 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC17.66■□□□□ 0.42
TOP1P11387 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC17.66■□□□□ 0.42
TOP1P11387 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC17.66■□□□□ 0.42
TOP1P11387 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
TOP1P11387 HNRNPA1P48-202ENST00000565308 961 ntBASIC17.66■□□□□ 0.42
TOP1P11387 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
TOP1P11387 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC17.66■□□□□ 0.42
TOP1P11387 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC17.66■□□□□ 0.42
TOP1P11387 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC17.66■□□□□ 0.42
TOP1P11387 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC17.66■□□□□ 0.42
TOP1P11387 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC17.66■□□□□ 0.42
TOP1P11387 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TOP1P11387 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
TOP1P11387 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
TOP1P11387 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TOP1P11387 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TOP1P11387 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
TOP1P11387 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TOP1P11387 REXO1L6P-201ENST00000603433 1515 ntBASIC17.66■□□□□ 0.42
TOP1P11387 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC17.66■□□□□ 0.42
TOP1P11387 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
TOP1P11387 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
TOP1P11387 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
TOP1P11387 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TOP1P11387 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC17.66■□□□□ 0.42
TOP1P11387 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
TOP1P11387 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC17.66■□□□□ 0.42
TOP1P11387 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TOP1P11387 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
TOP1P11387 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TOP1P11387 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
TOP1P11387 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TOP1P11387 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
TOP1P11387 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC17.65■□□□□ 0.42
TOP1P11387 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TOP1P11387 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TOP1P11387 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TOP1P11387 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TOP1P11387 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TOP1P11387 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC17.65■□□□□ 0.42
TOP1P11387 OLR1-203ENST00000432556 950 ntTSL 2 BASIC17.65■□□□□ 0.42
TOP1P11387 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
TOP1P11387 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC17.65■□□□□ 0.42
TOP1P11387 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC17.65■□□□□ 0.42
TOP1P11387 C2orf69P2-201ENST00000562032 1123 ntBASIC17.65■□□□□ 0.42
TOP1P11387 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC17.65■□□□□ 0.42
TOP1P11387 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC17.65■□□□□ 0.42
TOP1P11387 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC17.65■□□□□ 0.42
TOP1P11387 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TOP1P11387 AC009542.2-202ENST00000619004 1067 ntBASIC17.65■□□□□ 0.42
TOP1P11387 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TOP1P11387 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC17.65■□□□□ 0.42
TOP1P11387 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TOP1P11387 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TOP1P11387 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TOP1P11387 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TOP1P11387 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TOP1P11387 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TOP1P11387 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
TOP1P11387 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC17.65■□□□□ 0.42
TOP1P11387 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC17.65■□□□□ 0.42
TOP1P11387 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TOP1P11387 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC17.65■□□□□ 0.42
TOP1P11387 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 116.3 ms