Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC14.88□□□□□ -0.03
CAPN1P07384 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC14.88□□□□□ -0.03
CAPN1P07384 AC007389.4-201ENST00000454674 793 ntBASIC14.88□□□□□ -0.03
CAPN1P07384 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC14.88□□□□□ -0.03
CAPN1P07384 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC14.88□□□□□ -0.03
CAPN1P07384 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CAPN1P07384 AC036164.1-201ENST00000570544 333 ntBASIC14.88□□□□□ -0.03
CAPN1P07384 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC14.88□□□□□ -0.03
CAPN1P07384 AC000095.1-201ENST00000603208 874 ntBASIC14.88□□□□□ -0.03
CAPN1P07384 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
CAPN1P07384 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC14.88□□□□□ -0.03
CAPN1P07384 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
CAPN1P07384 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
CAPN1P07384 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC14.88□□□□□ -0.03
CAPN1P07384 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC14.88□□□□□ -0.03
CAPN1P07384 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC14.88□□□□□ -0.03
CAPN1P07384 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CAPN1P07384 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC14.88□□□□□ -0.03
CAPN1P07384 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC14.88□□□□□ -0.03
CAPN1P07384 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
CAPN1P07384 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CAPN1P07384 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CAPN1P07384 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CAPN1P07384 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CAPN1P07384 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CAPN1P07384 AC005089.1-201ENST00000619486 2241 ntBASIC14.88□□□□□ -0.03
CAPN1P07384 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CAPN1P07384 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
CAPN1P07384 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
CAPN1P07384 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
CAPN1P07384 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC14.87□□□□□ -0.03
CAPN1P07384 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC14.87□□□□□ -0.03
CAPN1P07384 PTENP1-202ENST00000532280 3996 ntBASIC14.87□□□□□ -0.03
CAPN1P07384 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
CAPN1P07384 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CAPN1P07384 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC14.87□□□□□ -0.03
CAPN1P07384 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CAPN1P07384 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
CAPN1P07384 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
CAPN1P07384 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC14.87□□□□□ -0.03
CAPN1P07384 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC14.87□□□□□ -0.03
CAPN1P07384 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
CAPN1P07384 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CAPN1P07384 PKIG-203ENST00000372887 769 ntTSL 3 BASIC14.87□□□□□ -0.03
CAPN1P07384 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CAPN1P07384 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC14.87□□□□□ -0.03
CAPN1P07384 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC14.87□□□□□ -0.03
CAPN1P07384 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC14.87□□□□□ -0.03
CAPN1P07384 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CAPN1P07384 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC14.87□□□□□ -0.03
CAPN1P07384 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
CAPN1P07384 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC14.87□□□□□ -0.03
CAPN1P07384 HNRNPA1P13-201ENST00000510646 963 ntBASIC14.87□□□□□ -0.03
CAPN1P07384 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC14.87□□□□□ -0.03
CAPN1P07384 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC14.87□□□□□ -0.03
CAPN1P07384 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC14.87□□□□□ -0.03
CAPN1P07384 BRI3BPP1-201ENST00000594224 787 ntBASIC14.87□□□□□ -0.03
CAPN1P07384 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC14.87□□□□□ -0.03
CAPN1P07384 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
CAPN1P07384 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC14.87□□□□□ -0.03
CAPN1P07384 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CAPN1P07384 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC14.87□□□□□ -0.03
CAPN1P07384 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CAPN1P07384 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
CAPN1P07384 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CAPN1P07384 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
CAPN1P07384 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CAPN1P07384 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CAPN1P07384 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC14.87□□□□□ -0.03
CAPN1P07384 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CAPN1P07384 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
CAPN1P07384 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CAPN1P07384 AC139749.1-202ENST00000617529 3139 ntBASIC14.87□□□□□ -0.03
CAPN1P07384 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
CAPN1P07384 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CAPN1P07384 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
CAPN1P07384 AL122018.1-201ENST00000446607 2310 ntBASIC14.87□□□□□ -0.03
CAPN1P07384 AMT-232ENST00000636199 1546 ntTSL 5 BASIC14.87□□□□□ -0.03
CAPN1P07384 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC14.86□□□□□ -0.03
CAPN1P07384 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
CAPN1P07384 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
CAPN1P07384 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CAPN1P07384 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CAPN1P07384 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CAPN1P07384 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CAPN1P07384 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
CAPN1P07384 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
CAPN1P07384 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC14.86□□□□□ -0.03
CAPN1P07384 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
CAPN1P07384 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC14.86□□□□□ -0.03
CAPN1P07384 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC14.86□□□□□ -0.03
CAPN1P07384 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC14.86□□□□□ -0.03
CAPN1P07384 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
CAPN1P07384 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
CAPN1P07384 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CAPN1P07384 AC138969.2-201ENST00000532739 9932 ntBASIC14.86□□□□□ -0.03
CAPN1P07384 AC018529.2-202ENST00000611482 3087 ntBASIC14.86□□□□□ -0.03
CAPN1P07384 GPSM2-202ENST00000406462 7433 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
CAPN1P07384 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CAPN1P07384 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC14.86□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms