Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CTSDP07339 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC12.53□□□□□ -0.4
CTSDP07339 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CTSDP07339 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
CTSDP07339 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC12.53□□□□□ -0.4
CTSDP07339 AC107918.4-201ENST00000641966 3141 ntBASIC12.53□□□□□ -0.4
CTSDP07339 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
CTSDP07339 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CTSDP07339 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CTSDP07339 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
CTSDP07339 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
CTSDP07339 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CTSDP07339 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CTSDP07339 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CTSDP07339 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CTSDP07339 ADK-205ENST00000539909 1866 ntTSL 2 BASIC12.53□□□□□ -0.4
CTSDP07339 AC020910.6-201ENST00000623084 1459 ntBASIC12.53□□□□□ -0.4
CTSDP07339 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
CTSDP07339 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC12.52□□□□□ -0.4
CTSDP07339 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
CTSDP07339 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC12.52□□□□□ -0.4
CTSDP07339 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC12.52□□□□□ -0.4
CTSDP07339 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
CTSDP07339 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC12.52□□□□□ -0.4
CTSDP07339 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC12.52□□□□□ -0.4
CTSDP07339 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC12.52□□□□□ -0.4
CTSDP07339 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.4
CTSDP07339 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
CTSDP07339 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.4
CTSDP07339 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
CTSDP07339 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC12.52□□□□□ -0.4
CTSDP07339 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
CTSDP07339 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
CTSDP07339 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
CTSDP07339 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
CTSDP07339 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
CTSDP07339 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC12.52□□□□□ -0.41
CTSDP07339 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CTSDP07339 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CTSDP07339 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CTSDP07339 PMP22-202ENST00000395936 816 ntTSL 3 BASIC12.52□□□□□ -0.41
CTSDP07339 AC004832.2-201ENST00000426397 482 ntBASIC12.52□□□□□ -0.41
CTSDP07339 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
CTSDP07339 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC12.52□□□□□ -0.41
CTSDP07339 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
CTSDP07339 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC12.52□□□□□ -0.41
CTSDP07339 GATD1-206ENST00000526325 756 ntTSL 5 BASIC12.52□□□□□ -0.41
CTSDP07339 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC12.52□□□□□ -0.41
CTSDP07339 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC12.52□□□□□ -0.41
CTSDP07339 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC12.52□□□□□ -0.41
CTSDP07339 WDR88-203ENST00000592765 651 ntTSL 5 BASIC12.52□□□□□ -0.41
CTSDP07339 MTDHP5-201ENST00000598980 586 ntBASIC12.52□□□□□ -0.41
CTSDP07339 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CTSDP07339 AC105206.1-202ENST00000314927 2368 ntBASIC12.52□□□□□ -0.41
CTSDP07339 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CTSDP07339 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
CTSDP07339 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
CTSDP07339 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC12.52□□□□□ -0.41
CTSDP07339 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CTSDP07339 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
CTSDP07339 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CTSDP07339 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC12.52□□□□□ -0.41
CTSDP07339 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
CTSDP07339 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
CTSDP07339 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
CTSDP07339 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC12.52□□□□□ -0.41
CTSDP07339 AL157414.3-201ENST00000624276 1954 ntBASIC12.52□□□□□ -0.41
CTSDP07339 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC12.52□□□□□ -0.41
CTSDP07339 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
CTSDP07339 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC12.52□□□□□ -0.41
CTSDP07339 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CTSDP07339 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CTSDP07339 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
CTSDP07339 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CTSDP07339 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC12.52□□□□□ -0.41
CTSDP07339 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC12.52□□□□□ -0.41
CTSDP07339 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC12.52□□□□□ -0.41
CTSDP07339 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
CTSDP07339 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC12.52□□□□□ -0.41
CTSDP07339 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CTSDP07339 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.41
CTSDP07339 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
CTSDP07339 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CTSDP07339 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CTSDP07339 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC12.51□□□□□ -0.41
CTSDP07339 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC12.51□□□□□ -0.41
CTSDP07339 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CTSDP07339 MAPT-IT1-201ENST00000624111 3016 ntBASIC12.51□□□□□ -0.41
CTSDP07339 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC12.51□□□□□ -0.41
CTSDP07339 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CTSDP07339 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CTSDP07339 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CTSDP07339 HADH-202ENST00000403312 1752 ntTSL 5 BASIC12.51□□□□□ -0.41
CTSDP07339 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
CTSDP07339 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CTSDP07339 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC12.51□□□□□ -0.41
CTSDP07339 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
CTSDP07339 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CTSDP07339 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
CTSDP07339 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms