Protein–RNA interactions for Protein: O75382

TRIM3, Tripartite motif-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3O75382 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRIM3O75382 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC14.1□□□□□ -0.15
TRIM3O75382 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
TRIM3O75382 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TRIM3O75382 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC14.1□□□□□ -0.15
TRIM3O75382 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRIM3O75382 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRIM3O75382 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRIM3O75382 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC14.1□□□□□ -0.15
TRIM3O75382 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRIM3O75382 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TRIM3O75382 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC14.1□□□□□ -0.15
TRIM3O75382 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TRIM3O75382 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
TRIM3O75382 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC14.1□□□□□ -0.15
TRIM3O75382 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRIM3O75382 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
TRIM3O75382 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRIM3O75382 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
TRIM3O75382 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRIM3O75382 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC14.1□□□□□ -0.15
TRIM3O75382 GK-202ENST00000378941 458 ntTSL 3 BASIC14.1□□□□□ -0.15
TRIM3O75382 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRIM3O75382 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TRIM3O75382 RPL5P21-201ENST00000404620 815 ntBASIC14.1□□□□□ -0.15
TRIM3O75382 MPV17-208ENST00000405076 603 ntTSL 5 BASIC14.1□□□□□ -0.15
TRIM3O75382 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TRIM3O75382 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC14.1□□□□□ -0.15
TRIM3O75382 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC14.1□□□□□ -0.15
TRIM3O75382 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC14.1□□□□□ -0.15
TRIM3O75382 USP32P1-208ENST00000506594 1164 ntBASIC14.1□□□□□ -0.15
TRIM3O75382 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC14.1□□□□□ -0.15
TRIM3O75382 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC14.1□□□□□ -0.15
TRIM3O75382 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
TRIM3O75382 PUDP-206ENST00000540122 825 ntTSL 2 BASIC14.1□□□□□ -0.15
TRIM3O75382 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC14.1□□□□□ -0.15
TRIM3O75382 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC14.1□□□□□ -0.15
TRIM3O75382 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TRIM3O75382 AP001063.1-201ENST00000568332 529 ntBASIC14.1□□□□□ -0.15
TRIM3O75382 AC009486.1-201ENST00000569860 813 ntBASIC14.1□□□□□ -0.15
TRIM3O75382 PIGL-212ENST00000581006 554 ntTSL 4 BASIC14.1□□□□□ -0.15
TRIM3O75382 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
TRIM3O75382 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC14.1□□□□□ -0.15
TRIM3O75382 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRIM3O75382 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC14.1□□□□□ -0.15
TRIM3O75382 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC14.1□□□□□ -0.15
TRIM3O75382 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRIM3O75382 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRIM3O75382 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRIM3O75382 AMT-224ENST00000635808 1610 ntTSL 5 BASIC14.1□□□□□ -0.15
TRIM3O75382 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRIM3O75382 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRIM3O75382 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRIM3O75382 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRIM3O75382 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRIM3O75382 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TRIM3O75382 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC14.1□□□□□ -0.15
TRIM3O75382 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRIM3O75382 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
TRIM3O75382 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRIM3O75382 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
TRIM3O75382 AL138799.1-201ENST00000448213 1675 ntBASIC14.1□□□□□ -0.15
TRIM3O75382 UCKL1-AS1-201ENST00000623569 3602 ntBASIC14.1□□□□□ -0.15
TRIM3O75382 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRIM3O75382 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRIM3O75382 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRIM3O75382 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC14.09□□□□□ -0.15
TRIM3O75382 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC14.09□□□□□ -0.15
TRIM3O75382 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
TRIM3O75382 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRIM3O75382 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRIM3O75382 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRIM3O75382 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRIM3O75382 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC14.09□□□□□ -0.15
TRIM3O75382 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
TRIM3O75382 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRIM3O75382 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRIM3O75382 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
TRIM3O75382 OR8S1-201ENST00000310194 1080 ntBASIC14.09□□□□□ -0.15
TRIM3O75382 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
TRIM3O75382 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
TRIM3O75382 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC14.09□□□□□ -0.15
TRIM3O75382 PFN2-205ENST00000461868 613 ntTSL 2 BASIC14.09□□□□□ -0.15
TRIM3O75382 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC14.09□□□□□ -0.15
TRIM3O75382 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
TRIM3O75382 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC14.09□□□□□ -0.15
TRIM3O75382 TDH-203ENST00000531764 1110 ntBASIC14.09□□□□□ -0.15
TRIM3O75382 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC14.09□□□□□ -0.15
TRIM3O75382 IFT20-206ENST00000578122 834 ntTSL 2 BASIC14.09□□□□□ -0.15
TRIM3O75382 IFT20-208ENST00000578985 831 ntTSL 3 BASIC14.09□□□□□ -0.15
TRIM3O75382 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC14.09□□□□□ -0.15
TRIM3O75382 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC14.09□□□□□ -0.15
TRIM3O75382 METTL26-214ENST00000614890 801 ntTSL 3 BASIC14.09□□□□□ -0.15
TRIM3O75382 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
TRIM3O75382 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC14.09□□□□□ -0.15
TRIM3O75382 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
TRIM3O75382 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
TRIM3O75382 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC14.09□□□□□ -0.15
TRIM3O75382 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRIM3O75382 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC14.09□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms