Protein–RNA interactions for Protein: O14647

CHD2, Chromodomain-helicase-DNA-binding protein 2, humanhuman

Known RBP Predictions only

Length 1,828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2O14647 HDAC2-AS2-203ENST00000436876 591 ntTSL 5 BASIC20.15■□□□□ 0.82
CHD2O14647 AC106869.1-201ENST00000448713 577 ntTSL 4 BASIC20.15■□□□□ 0.82
CHD2O14647 AC025186.1-201ENST00000478174 870 ntBASIC20.15■□□□□ 0.82
CHD2O14647 HINT1-205ENST00000508488 703 ntTSL 2 BASIC20.15■□□□□ 0.82
CHD2O14647 IGHEP1-201ENST00000521393 651 ntBASIC20.15■□□□□ 0.82
CHD2O14647 TNFSF13B-206ENST00000542136 495 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CHD2O14647 LOXL1-AS1-207ENST00000565689 735 ntTSL 3 BASIC20.15■□□□□ 0.82
CHD2O14647 NAV1-210ENST00000593583 726 ntBASIC20.15■□□□□ 0.82
CHD2O14647 NMRK2-202ENST00000593949 869 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
CHD2O14647 NMRK2-204ENST00000599576 691 ntTSL 3 BASIC20.15■□□□□ 0.82
CHD2O14647 LINC01002-234ENST00000633808 848 ntTSL 5 BASIC20.15■□□□□ 0.82
CHD2O14647 NIFK-AS1-203ENST00000419902 1316 ntTSL 2 BASIC20.15■□□□□ 0.82
CHD2O14647 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CHD2O14647 AP003680.1-201ENST00000598970 3660 ntBASIC20.15■□□□□ 0.82
CHD2O14647 MRPL55-205ENST00000366731 1423 ntTSL 2 BASIC20.15■□□□□ 0.82
CHD2O14647 BFAR-203ENST00000562442 1414 ntTSL 2 BASIC20.15■□□□□ 0.82
CHD2O14647 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC20.15■□□□□ 0.82
CHD2O14647 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CHD2O14647 COQ4-201ENST00000300452 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CHD2O14647 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
CHD2O14647 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC20.14■□□□□ 0.82
CHD2O14647 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
CHD2O14647 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC20.14■□□□□ 0.82
CHD2O14647 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.82
CHD2O14647 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC20.14■□□□□ 0.82
CHD2O14647 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC20.14■□□□□ 0.82
CHD2O14647 AC020658.6-201ENST00000623564 1870 ntBASIC20.14■□□□□ 0.82
CHD2O14647 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC20.14■□□□□ 0.82
CHD2O14647 UPK1A-201ENST00000222275 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CHD2O14647 TNNT1-202ENST00000356783 934 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
CHD2O14647 UPK1A-202ENST00000379013 1016 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CHD2O14647 CCDC12-202ENST00000425441 1097 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
CHD2O14647 AC008026.2-201ENST00000495438 348 ntBASIC20.14■□□□□ 0.81
CHD2O14647 CRADD-205ENST00000548483 1056 ntTSL 2 BASIC20.14■□□□□ 0.81
CHD2O14647 KRT17P4-206ENST00000584151 719 ntTSL 4 BASIC20.14■□□□□ 0.81
CHD2O14647 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
CHD2O14647 RHOG-201ENST00000351018 1319 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CHD2O14647 BCCIP-203ENST00000368759 1433 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CHD2O14647 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CHD2O14647 SERF1B-204ENST00000506542 1666 ntTSL 3 BASIC20.14■□□□□ 0.81
CHD2O14647 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CHD2O14647 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CHD2O14647 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CHD2O14647 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CHD2O14647 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CHD2O14647 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CHD2O14647 OPN1MW2-201ENST00000369929 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CHD2O14647 AL121983.2-202ENST00000419983 535 ntTSL 3 BASIC20.13■□□□□ 0.81
CHD2O14647 HMGB3-204ENST00000448905 812 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
CHD2O14647 GRPEL2P1-201ENST00000453145 339 ntBASIC20.13■□□□□ 0.81
CHD2O14647 TAGLN3-203ENST00000455401 1164 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CHD2O14647 FRMD4A-204ENST00000475141 1233 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CHD2O14647 RPS18P9-201ENST00000482817 460 ntBASIC20.13■□□□□ 0.81
CHD2O14647 AC008735.2-201ENST00000589456 549 ntTSL 5 BASIC20.13■□□□□ 0.81
CHD2O14647 PSMA6-215ENST00000622405 978 ntTSL 2 BASIC20.13■□□□□ 0.81
CHD2O14647 RPF1-201ENST00000370654 1385 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CHD2O14647 CT55-201ENST00000276241 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
CHD2O14647 SEC13-202ENST00000350697 1425 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
CHD2O14647 MKRN2-202ENST00000411987 1436 ntTSL 2 BASIC20.13■□□□□ 0.81
CHD2O14647 CRYM-202ENST00000543948 1400 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
CHD2O14647 PAIP2-201ENST00000265192 1459 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CHD2O14647 LAP3P2-201ENST00000454686 1454 ntBASIC20.13■□□□□ 0.81
CHD2O14647 ZDHHC6-201ENST00000369404 1721 ntAPPRIS ALT1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CHD2O14647 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CHD2O14647 GABRB2-205ENST00000517901 1779 ntTSL 5 BASIC20.13■□□□□ 0.81
CHD2O14647 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC20.13■□□□□ 0.81
CHD2O14647 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CHD2O14647 NBPF3-205ENST00000454000 2133 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
CHD2O14647 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC20.13■□□□□ 0.81
CHD2O14647 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC20.13■□□□□ 0.81
CHD2O14647 WARS-232ENST00000556645 2508 ntTSL 5 BASIC20.13■□□□□ 0.81
CHD2O14647 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
CHD2O14647 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CHD2O14647 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
CHD2O14647 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CHD2O14647 OXSM-201ENST00000280701 1519 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CHD2O14647 L2HGDH-201ENST00000261699 1377 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CHD2O14647 LST1-204ENST00000376086 554 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CHD2O14647 CD300LG-203ENST00000377203 1060 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
CHD2O14647 HIST1H4B-201ENST00000377745 438 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
CHD2O14647 RPL3P2-204ENST00000413027 1203 ntBASIC20.13■□□□□ 0.81
CHD2O14647 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC20.13■□□□□ 0.81
CHD2O14647 AC068057.1-201ENST00000453322 709 ntTSL 2 BASIC20.13■□□□□ 0.81
CHD2O14647 CHCHD2P2-201ENST00000503744 321 ntBASIC20.13■□□□□ 0.81
CHD2O14647 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC20.13■□□□□ 0.81
CHD2O14647 AC018846.1-201ENST00000568231 183 ntBASIC20.13■□□□□ 0.81
CHD2O14647 AL021707.6-201ENST00000609212 491 ntBASIC20.13■□□□□ 0.81
CHD2O14647 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CHD2O14647 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC20.13■□□□□ 0.81
CHD2O14647 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CHD2O14647 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
CHD2O14647 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC20.12■□□□□ 0.81
CHD2O14647 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CHD2O14647 LINC02199-201ENST00000506655 2702 ntBASIC20.12■□□□□ 0.81
CHD2O14647 SERPINA1-209ENST00000449399 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CHD2O14647 PPHLN1-223ENST00000610488 1521 ntTSL 5 BASIC20.12■□□□□ 0.81
CHD2O14647 PRELID3B-202ENST00000371033 943 ntTSL 2 BASIC20.12■□□□□ 0.81
CHD2O14647 SAT1-201ENST00000379251 801 ntTSL 2 BASIC20.12■□□□□ 0.81
CHD2O14647 SAT1-202ENST00000379253 909 ntTSL 2 BASIC20.12■□□□□ 0.81
CHD2O14647 SAT1-203ENST00000379254 868 ntTSL 3 BASIC20.12■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 58.8 ms