Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
UPK1AO00322 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
UPK1AO00322 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
UPK1AO00322 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
UPK1AO00322 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
UPK1AO00322 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC14.26□□□□□ -0.13
UPK1AO00322 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
UPK1AO00322 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
UPK1AO00322 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC14.26□□□□□ -0.13
UPK1AO00322 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
UPK1AO00322 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
UPK1AO00322 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC14.26□□□□□ -0.13
UPK1AO00322 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC14.26□□□□□ -0.13
UPK1AO00322 TEX30-203ENST00000376022 828 ntTSL 2 BASIC14.26□□□□□ -0.13
UPK1AO00322 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
UPK1AO00322 PIN1P1-201ENST00000412108 996 ntBASIC14.26□□□□□ -0.13
UPK1AO00322 GOLGA6L11P-201ENST00000417252 1298 ntBASIC14.26□□□□□ -0.13
UPK1AO00322 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC14.26□□□□□ -0.13
UPK1AO00322 HLA-K-203ENST00000430151 1046 ntBASIC14.26□□□□□ -0.13
UPK1AO00322 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC14.26□□□□□ -0.13
UPK1AO00322 GALT-202ENST00000450095 1280 ntTSL 2 BASIC14.26□□□□□ -0.13
UPK1AO00322 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC14.26□□□□□ -0.13
UPK1AO00322 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC14.26□□□□□ -0.13
UPK1AO00322 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC14.26□□□□□ -0.13
UPK1AO00322 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC14.26□□□□□ -0.13
UPK1AO00322 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC14.26□□□□□ -0.13
UPK1AO00322 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
UPK1AO00322 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC14.26□□□□□ -0.13
UPK1AO00322 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC14.26□□□□□ -0.13
UPK1AO00322 AC107918.4-201ENST00000641966 3141 ntBASIC14.26□□□□□ -0.13
UPK1AO00322 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
UPK1AO00322 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
UPK1AO00322 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
UPK1AO00322 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC14.26□□□□□ -0.13
UPK1AO00322 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
UPK1AO00322 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
UPK1AO00322 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
UPK1AO00322 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
UPK1AO00322 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
UPK1AO00322 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
UPK1AO00322 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC14.26□□□□□ -0.13
UPK1AO00322 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC14.26□□□□□ -0.13
UPK1AO00322 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
UPK1AO00322 AC023090.2-201ENST00000625182 2110 ntBASIC14.26□□□□□ -0.13
UPK1AO00322 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
UPK1AO00322 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC14.26□□□□□ -0.13
UPK1AO00322 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
UPK1AO00322 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
UPK1AO00322 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
UPK1AO00322 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
UPK1AO00322 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
UPK1AO00322 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
UPK1AO00322 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
UPK1AO00322 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
UPK1AO00322 CNTNAP3P2-201ENST00000617175 3861 ntBASIC14.25□□□□□ -0.13
UPK1AO00322 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
UPK1AO00322 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
UPK1AO00322 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
UPK1AO00322 KRT8P22-201ENST00000562317 1415 ntBASIC14.25□□□□□ -0.13
UPK1AO00322 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
UPK1AO00322 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
UPK1AO00322 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
UPK1AO00322 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
UPK1AO00322 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC14.25□□□□□ -0.13
UPK1AO00322 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC14.25□□□□□ -0.13
UPK1AO00322 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
UPK1AO00322 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC14.25□□□□□ -0.13
UPK1AO00322 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
UPK1AO00322 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
UPK1AO00322 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
UPK1AO00322 WDR53-203ENST00000429115 683 ntTSL 2 BASIC14.25□□□□□ -0.13
UPK1AO00322 ELK1P1-201ENST00000485699 580 ntBASIC14.25□□□□□ -0.13
UPK1AO00322 HNRNPA1P13-201ENST00000510646 963 ntBASIC14.25□□□□□ -0.13
UPK1AO00322 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC14.25□□□□□ -0.13
UPK1AO00322 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
UPK1AO00322 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC14.25□□□□□ -0.13
UPK1AO00322 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC14.25□□□□□ -0.13
UPK1AO00322 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC14.25□□□□□ -0.13
UPK1AO00322 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
UPK1AO00322 SPDYE22P-201ENST00000582158 798 ntBASIC14.25□□□□□ -0.13
UPK1AO00322 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC14.25□□□□□ -0.13
UPK1AO00322 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC14.25□□□□□ -0.13
UPK1AO00322 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC14.25□□□□□ -0.13
UPK1AO00322 YTHDF3-AS1-201ENST00000603538 718 ntBASIC14.25□□□□□ -0.13
UPK1AO00322 BX539320.1-201ENST00000623759 877 ntBASIC14.25□□□□□ -0.13
UPK1AO00322 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
UPK1AO00322 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
UPK1AO00322 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
UPK1AO00322 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
UPK1AO00322 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC14.25□□□□□ -0.13
UPK1AO00322 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
UPK1AO00322 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC14.25□□□□□ -0.13
UPK1AO00322 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
UPK1AO00322 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
UPK1AO00322 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
UPK1AO00322 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC14.25□□□□□ -0.13
UPK1AO00322 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
UPK1AO00322 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
UPK1AO00322 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
UPK1AO00322 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms