Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC15.66■□□□□ 0.1
CCDC188H7C350 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC188H7C350 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC188H7C350 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
CCDC188H7C350 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC188H7C350 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC15.66■□□□□ 0.1
CCDC188H7C350 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC188H7C350 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC188H7C350 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
CCDC188H7C350 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC188H7C350 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC15.66■□□□□ 0.1
CCDC188H7C350 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC188H7C350 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC188H7C350 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC188H7C350 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC188H7C350 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCDC188H7C350 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCDC188H7C350 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCDC188H7C350 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCDC188H7C350 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCDC188H7C350 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
CCDC188H7C350 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
CCDC188H7C350 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CCDC188H7C350 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
CCDC188H7C350 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
CCDC188H7C350 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC15.65■□□□□ 0.1
CCDC188H7C350 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC15.65■□□□□ 0.1
CCDC188H7C350 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCDC188H7C350 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC15.65■□□□□ 0.1
CCDC188H7C350 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCDC188H7C350 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CCDC188H7C350 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC15.65■□□□□ 0.1
CCDC188H7C350 AL353779.1-201ENST00000434793 351 ntBASIC15.65■□□□□ 0.1
CCDC188H7C350 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC15.65■□□□□ 0.1
CCDC188H7C350 DNAJB3-201ENST00000446806 729 ntBASIC15.65■□□□□ 0.1
CCDC188H7C350 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC15.65■□□□□ 0.1
CCDC188H7C350 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC15.65■□□□□ 0.1
CCDC188H7C350 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC15.65■□□□□ 0.1
CCDC188H7C350 CBFB-203ENST00000561924 584 ntTSL 5 BASIC15.65■□□□□ 0.1
CCDC188H7C350 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC15.65■□□□□ 0.1
CCDC188H7C350 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CCDC188H7C350 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CCDC188H7C350 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCDC188H7C350 KRT8P14-201ENST00000414254 1442 ntBASIC15.65■□□□□ 0.1
CCDC188H7C350 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
CCDC188H7C350 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CCDC188H7C350 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCDC188H7C350 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
CCDC188H7C350 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
CCDC188H7C350 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CCDC188H7C350 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC15.65■□□□□ 0.1
CCDC188H7C350 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
CCDC188H7C350 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
CCDC188H7C350 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
CCDC188H7C350 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.1
CCDC188H7C350 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CCDC188H7C350 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
CCDC188H7C350 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CCDC188H7C350 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC15.64■□□□□ 0.09
CCDC188H7C350 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC15.64■□□□□ 0.09
CCDC188H7C350 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CCDC188H7C350 AC079781.5-202ENST00000641784 3743 ntBASIC15.64■□□□□ 0.09
CCDC188H7C350 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CCDC188H7C350 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC15.64■□□□□ 0.09
CCDC188H7C350 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC15.64■□□□□ 0.09
CCDC188H7C350 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
CCDC188H7C350 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CCDC188H7C350 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
CCDC188H7C350 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC15.64■□□□□ 0.09
CCDC188H7C350 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC15.64■□□□□ 0.09
CCDC188H7C350 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC15.64■□□□□ 0.09
CCDC188H7C350 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC15.64■□□□□ 0.09
CCDC188H7C350 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC15.64■□□□□ 0.09
CCDC188H7C350 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CCDC188H7C350 AC130686.1-201ENST00000622936 2466 ntBASIC15.64■□□□□ 0.09
CCDC188H7C350 AC087386.2-201ENST00000623212 4637 ntBASIC15.64■□□□□ 0.09
CCDC188H7C350 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CCDC188H7C350 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CCDC188H7C350 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CCDC188H7C350 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC15.64■□□□□ 0.09
CCDC188H7C350 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC15.64■□□□□ 0.09
CCDC188H7C350 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC15.64■□□□□ 0.09
CCDC188H7C350 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CCDC188H7C350 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
CCDC188H7C350 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC15.64■□□□□ 0.09
CCDC188H7C350 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC15.64■□□□□ 0.09
CCDC188H7C350 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CCDC188H7C350 AC011840.2-201ENST00000563063 1520 ntBASIC15.63■□□□□ 0.09
CCDC188H7C350 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CCDC188H7C350 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CCDC188H7C350 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC15.63■□□□□ 0.09
CCDC188H7C350 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CCDC188H7C350 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC15.63■□□□□ 0.09
CCDC188H7C350 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
CCDC188H7C350 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CCDC188H7C350 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
CCDC188H7C350 TCAF1P1-201ENST00000414990 2232 ntBASIC15.63■□□□□ 0.09
CCDC188H7C350 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
CCDC188H7C350 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CCDC188H7C350 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms