Protein–RNA interactions for Protein: A0A1B0GX56

TRDV1, T-cell receptor delta variable 1 (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRDV1A0A1B0GX56 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC13.25□□□□□ -0.29
TRDV1A0A1B0GX56 LITAF-210ENST00000571976 548 ntTSL 2 BASIC13.25□□□□□ -0.29
TRDV1A0A1B0GX56 LITAF-214ENST00000574703 486 ntTSL 2 BASIC13.25□□□□□ -0.29
TRDV1A0A1B0GX56 AC018529.1-201ENST00000613063 361 ntBASIC13.25□□□□□ -0.29
TRDV1A0A1B0GX56 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC13.25□□□□□ -0.29
TRDV1A0A1B0GX56 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC13.25□□□□□ -0.29
TRDV1A0A1B0GX56 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC13.25□□□□□ -0.29
TRDV1A0A1B0GX56 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
TRDV1A0A1B0GX56 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
TRDV1A0A1B0GX56 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
TRDV1A0A1B0GX56 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
TRDV1A0A1B0GX56 LINC01792-201ENST00000452787 2050 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
TRDV1A0A1B0GX56 CATSPERE-201ENST00000366531 3038 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
TRDV1A0A1B0GX56 AP5Z1-201ENST00000348624 2901 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
TRDV1A0A1B0GX56 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
TRDV1A0A1B0GX56 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC13.25□□□□□ -0.29
TRDV1A0A1B0GX56 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
TRDV1A0A1B0GX56 ADCY3-202ENST00000405392 4397 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
TRDV1A0A1B0GX56 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRDV1A0A1B0GX56 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRDV1A0A1B0GX56 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC13.24□□□□□ -0.29
TRDV1A0A1B0GX56 AC005562.1-201ENST00000583030 3219 ntBASIC13.24□□□□□ -0.29
TRDV1A0A1B0GX56 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRDV1A0A1B0GX56 ATG9A-201ENST00000361242 3130 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
TRDV1A0A1B0GX56 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRDV1A0A1B0GX56 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC13.24□□□□□ -0.29
TRDV1A0A1B0GX56 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRDV1A0A1B0GX56 FAM200B-201ENST00000422728 2962 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRDV1A0A1B0GX56 SNAP91-215ENST00000521743 4263 ntAPPRIS P2 TSL 5 BASIC13.24□□□□□ -0.29
TRDV1A0A1B0GX56 TMCC2-201ENST00000329800 2818 ntTSL 2 BASIC13.24□□□□□ -0.29
TRDV1A0A1B0GX56 CARHSP1-216ENST00000610831 2841 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
TRDV1A0A1B0GX56 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRDV1A0A1B0GX56 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
TRDV1A0A1B0GX56 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC13.24□□□□□ -0.29
TRDV1A0A1B0GX56 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRDV1A0A1B0GX56 DNM1-212ENST00000627543 4734 ntAPPRIS ALT1 TSL 5 BASIC13.24□□□□□ -0.29
TRDV1A0A1B0GX56 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
TRDV1A0A1B0GX56 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
TRDV1A0A1B0GX56 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRDV1A0A1B0GX56 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
TRDV1A0A1B0GX56 FAM58CP-201ENST00000435741 640 ntBASIC13.24□□□□□ -0.29
TRDV1A0A1B0GX56 RPL13P2-201ENST00000440687 659 ntBASIC13.24□□□□□ -0.29
TRDV1A0A1B0GX56 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC13.24□□□□□ -0.29
TRDV1A0A1B0GX56 AC069335.1-201ENST00000489972 472 ntBASIC13.24□□□□□ -0.29
TRDV1A0A1B0GX56 GATB-205ENST00000508611 605 ntTSL 2 BASIC13.24□□□□□ -0.29
TRDV1A0A1B0GX56 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC13.24□□□□□ -0.29
TRDV1A0A1B0GX56 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC13.24□□□□□ -0.29
TRDV1A0A1B0GX56 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC13.24□□□□□ -0.29
TRDV1A0A1B0GX56 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
TRDV1A0A1B0GX56 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
TRDV1A0A1B0GX56 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC13.24□□□□□ -0.29
TRDV1A0A1B0GX56 INO80C-210ENST00000590757 595 ntTSL 2 BASIC13.24□□□□□ -0.29
TRDV1A0A1B0GX56 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
TRDV1A0A1B0GX56 MIR6069-201ENST00000620069 79 ntBASIC13.24□□□□□ -0.29
TRDV1A0A1B0GX56 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC13.24□□□□□ -0.29
TRDV1A0A1B0GX56 AF228730.6-201ENST00000641497 218 ntBASIC13.24□□□□□ -0.29
TRDV1A0A1B0GX56 AC084121.3-201ENST00000641716 218 ntBASIC13.24□□□□□ -0.29
TRDV1A0A1B0GX56 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
TRDV1A0A1B0GX56 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC13.24□□□□□ -0.29
TRDV1A0A1B0GX56 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRDV1A0A1B0GX56 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC13.24□□□□□ -0.29
TRDV1A0A1B0GX56 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC13.24□□□□□ -0.29
TRDV1A0A1B0GX56 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC13.24□□□□□ -0.29
TRDV1A0A1B0GX56 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC13.24□□□□□ -0.29
TRDV1A0A1B0GX56 METTL13-203ENST00000367737 2865 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
TRDV1A0A1B0GX56 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC13.24□□□□□ -0.29
TRDV1A0A1B0GX56 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
TRDV1A0A1B0GX56 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRDV1A0A1B0GX56 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRDV1A0A1B0GX56 ATG9A-204ENST00000409422 2512 ntTSL 5 BASIC13.23□□□□□ -0.29
TRDV1A0A1B0GX56 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRDV1A0A1B0GX56 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
TRDV1A0A1B0GX56 TNFAIP8L1-201ENST00000327473 3814 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRDV1A0A1B0GX56 TNFAIP8L1-202ENST00000536716 3845 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
TRDV1A0A1B0GX56 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC13.23□□□□□ -0.29
TRDV1A0A1B0GX56 AL137783.1-201ENST00000623494 1896 ntBASIC13.23□□□□□ -0.29
TRDV1A0A1B0GX56 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRDV1A0A1B0GX56 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC13.23□□□□□ -0.29
TRDV1A0A1B0GX56 TMPRSS3-203ENST00000398405 2754 ntAPPRIS ALT1 TSL 5 BASIC13.23□□□□□ -0.29
TRDV1A0A1B0GX56 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRDV1A0A1B0GX56 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRDV1A0A1B0GX56 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
TRDV1A0A1B0GX56 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
TRDV1A0A1B0GX56 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRDV1A0A1B0GX56 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
TRDV1A0A1B0GX56 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
TRDV1A0A1B0GX56 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRDV1A0A1B0GX56 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC13.23□□□□□ -0.29
TRDV1A0A1B0GX56 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
TRDV1A0A1B0GX56 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRDV1A0A1B0GX56 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRDV1A0A1B0GX56 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
TRDV1A0A1B0GX56 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC13.23□□□□□ -0.29
TRDV1A0A1B0GX56 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
TRDV1A0A1B0GX56 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
TRDV1A0A1B0GX56 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC13.23□□□□□ -0.29
TRDV1A0A1B0GX56 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC13.23□□□□□ -0.29
TRDV1A0A1B0GX56 AC104692.2-201ENST00000603054 253 ntBASIC13.23□□□□□ -0.29
TRDV1A0A1B0GX56 RN7SL828P-201ENST00000607615 303 ntBASIC13.23□□□□□ -0.29
TRDV1A0A1B0GX56 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC13.23□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms