Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 SLC47A1-201ENST00000270570 3280 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
LINC01558Q9Y6Z2 CARS-201ENST00000278224 2491 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
LINC01558Q9Y6Z2 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
LINC01558Q9Y6Z2 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
LINC01558Q9Y6Z2 SIRPA-204ENST00000622179 4570 ntAPPRIS ALT1 TSL 5 BASIC7.68□□□□□ -1.18
LINC01558Q9Y6Z2 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC7.68□□□□□ -1.18
LINC01558Q9Y6Z2 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
LINC01558Q9Y6Z2 UBN1-202ENST00000396658 6336 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
LINC01558Q9Y6Z2 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
LINC01558Q9Y6Z2 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
LINC01558Q9Y6Z2 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
LINC01558Q9Y6Z2 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
LINC01558Q9Y6Z2 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC7.68□□□□□ -1.18
LINC01558Q9Y6Z2 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC7.68□□□□□ -1.18
LINC01558Q9Y6Z2 MIR939-201ENST00000401314 82 ntBASIC7.68□□□□□ -1.18
LINC01558Q9Y6Z2 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
LINC01558Q9Y6Z2 KLF4P1-201ENST00000412782 1185 ntBASIC7.68□□□□□ -1.18
LINC01558Q9Y6Z2 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC7.68□□□□□ -1.18
LINC01558Q9Y6Z2 OR2A1-AS1-201ENST00000462305 773 ntBASIC7.68□□□□□ -1.18
LINC01558Q9Y6Z2 AC068472.1-201ENST00000474589 881 ntBASIC7.68□□□□□ -1.18
LINC01558Q9Y6Z2 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC7.68□□□□□ -1.18
LINC01558Q9Y6Z2 AC009299.2-201ENST00000482477 511 ntBASIC7.68□□□□□ -1.18
LINC01558Q9Y6Z2 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC7.68□□□□□ -1.18
LINC01558Q9Y6Z2 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC7.68□□□□□ -1.18
LINC01558Q9Y6Z2 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC7.68□□□□□ -1.18
LINC01558Q9Y6Z2 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC7.68□□□□□ -1.18
LINC01558Q9Y6Z2 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC7.68□□□□□ -1.18
LINC01558Q9Y6Z2 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC7.68□□□□□ -1.18
LINC01558Q9Y6Z2 AC091167.2-201ENST00000579581 588 ntBASIC7.68□□□□□ -1.18
LINC01558Q9Y6Z2 TK1-205ENST00000590862 642 ntTSL 3 BASIC7.68□□□□□ -1.18
LINC01558Q9Y6Z2 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC7.68□□□□□ -1.18
LINC01558Q9Y6Z2 AL031985.4-201ENST00000642138 673 ntBASIC7.68□□□□□ -1.18
LINC01558Q9Y6Z2 SESN3-201ENST00000278499 1710 ntTSL 2 BASIC7.68□□□□□ -1.18
LINC01558Q9Y6Z2 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC7.68□□□□□ -1.18
LINC01558Q9Y6Z2 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
LINC01558Q9Y6Z2 ZNF263-202ENST00000538765 1721 ntTSL 2 BASIC7.68□□□□□ -1.18
LINC01558Q9Y6Z2 RNF220-202ENST00000355387 3099 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
LINC01558Q9Y6Z2 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
LINC01558Q9Y6Z2 OXR1-202ENST00000312046 4406 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
LINC01558Q9Y6Z2 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC7.68□□□□□ -1.18
LINC01558Q9Y6Z2 TRAPPC2L-211ENST00000565504 3102 ntTSL 2 BASIC7.68□□□□□ -1.18
LINC01558Q9Y6Z2 SPATA2-201ENST00000289431 4022 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
LINC01558Q9Y6Z2 NBR1-202ENST00000542611 2703 ntTSL 2 BASIC7.68□□□□□ -1.18
LINC01558Q9Y6Z2 DDC-214ENST00000622873 1839 ntTSL 3 BASIC7.68□□□□□ -1.18
LINC01558Q9Y6Z2 FLNA-204ENST00000369856 8241 ntAPPRIS ALT2 TSL 1 (best) BASIC7.68□□□□□ -1.18
LINC01558Q9Y6Z2 ARHGEF10L-203ENST00000375408 3685 ntTSL 5 BASIC7.68□□□□□ -1.18
LINC01558Q9Y6Z2 EXOC8-201ENST00000366645 5100 ntAPPRIS P1 BASIC7.68□□□□□ -1.18
LINC01558Q9Y6Z2 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC7.68□□□□□ -1.18
LINC01558Q9Y6Z2 KCNJ11-201ENST00000339994 2801 ntAPPRIS P1 BASIC7.68□□□□□ -1.18
LINC01558Q9Y6Z2 ESRRB-204ENST00000509242 2849 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
LINC01558Q9Y6Z2 ZSCAN20-202ENST00000373413 2367 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
LINC01558Q9Y6Z2 DNAJC11-202ENST00000377577 3311 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
LINC01558Q9Y6Z2 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
LINC01558Q9Y6Z2 NXPE3-205ENST00000491511 8074 ntAPPRIS P1 TSL 2 BASIC7.68□□□□□ -1.18
LINC01558Q9Y6Z2 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC7.68□□□□□ -1.18
LINC01558Q9Y6Z2 LINC01588-203ENST00000529902 4279 ntTSL 2 BASIC7.68□□□□□ -1.18
LINC01558Q9Y6Z2 SPATA31C1-202ENST00000602681 1927 ntTSL 2 BASIC7.68□□□□□ -1.18
LINC01558Q9Y6Z2 AC022364.1-202ENST00000617468 2409 ntBASIC7.68□□□□□ -1.18
LINC01558Q9Y6Z2 CLK3P2-201ENST00000427566 1453 ntBASIC7.68□□□□□ -1.18
LINC01558Q9Y6Z2 AL590428.1-201ENST00000428865 1973 ntTSL 2 BASIC7.68□□□□□ -1.18
LINC01558Q9Y6Z2 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC7.68□□□□□ -1.18
LINC01558Q9Y6Z2 TMBIM6-227ENST00000552699 2964 ntAPPRIS ALT2 TSL 5 BASIC7.68□□□□□ -1.18
LINC01558Q9Y6Z2 SRRT-216ENST00000618262 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC7.68□□□□□ -1.18
LINC01558Q9Y6Z2 ESR2-213ENST00000557772 5458 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
LINC01558Q9Y6Z2 CACNA1C-219ENST00000399649 6529 ntAPPRIS ALT2 TSL 1 (best) BASIC7.68□□□□□ -1.18
LINC01558Q9Y6Z2 QRICH1-204ENST00000424300 3009 ntAPPRIS P1 TSL 2 BASIC7.68□□□□□ -1.18
LINC01558Q9Y6Z2 FBLN1-208ENST00000442170 2531 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
LINC01558Q9Y6Z2 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC7.68□□□□□ -1.18
LINC01558Q9Y6Z2 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC7.68□□□□□ -1.18
LINC01558Q9Y6Z2 NAP1L2-201ENST00000373517 2550 ntAPPRIS P1 BASIC7.67□□□□□ -1.18
LINC01558Q9Y6Z2 CCBE1-202ENST00000439986 6227 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
LINC01558Q9Y6Z2 ZFYVE19-209ENST00000564258 2059 ntTSL 2 BASIC7.67□□□□□ -1.18
LINC01558Q9Y6Z2 C14orf119-201ENST00000319074 3660 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
LINC01558Q9Y6Z2 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
LINC01558Q9Y6Z2 FAM95B1-201ENST00000455995 4236 ntTSL 2 BASIC7.67□□□□□ -1.18
LINC01558Q9Y6Z2 TMEM169-202ENST00000406027 3174 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
LINC01558Q9Y6Z2 GMFB-201ENST00000358056 4301 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
LINC01558Q9Y6Z2 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
LINC01558Q9Y6Z2 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC7.67□□□□□ -1.18
LINC01558Q9Y6Z2 DPAGT1-201ENST00000354202 2205 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
LINC01558Q9Y6Z2 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
LINC01558Q9Y6Z2 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC7.67□□□□□ -1.18
LINC01558Q9Y6Z2 POM121L9P-201ENST00000414583 5018 ntTSL 2 BASIC7.67□□□□□ -1.18
LINC01558Q9Y6Z2 WDR66-202ENST00000397454 3420 ntAPPRIS ALT2 TSL 1 (best) BASIC7.67□□□□□ -1.18
LINC01558Q9Y6Z2 PRRC2A-202ENST00000376033 6893 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
LINC01558Q9Y6Z2 MARK2P9-201ENST00000430958 1727 ntBASIC7.67□□□□□ -1.18
LINC01558Q9Y6Z2 PARP10-203ENST00000524918 3469 ntAPPRIS ALT2 TSL 5 BASIC7.67□□□□□ -1.18
LINC01558Q9Y6Z2 ABCA2-223ENST00000614293 8146 ntTSL 5 BASIC7.67□□□□□ -1.18
LINC01558Q9Y6Z2 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
LINC01558Q9Y6Z2 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
LINC01558Q9Y6Z2 TMEM86A-201ENST00000280734 3595 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
LINC01558Q9Y6Z2 NLRP2-214ENST00000543010 3576 ntAPPRIS P3 TSL 1 (best) BASIC7.67□□□□□ -1.18
LINC01558Q9Y6Z2 GEMIN5-201ENST00000285873 5397 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
LINC01558Q9Y6Z2 EMBP1-203ENST00000622787 4235 ntTSL 2 BASIC7.67□□□□□ -1.18
LINC01558Q9Y6Z2 REPS1-205ENST00000415951 2424 ntTSL 5 BASIC7.67□□□□□ -1.18
LINC01558Q9Y6Z2 ERP44-201ENST00000262455 4854 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
LINC01558Q9Y6Z2 NUDT9-203ENST00000473942 2458 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
LINC01558Q9Y6Z2 PRKCE-201ENST00000306156 5650 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
LINC01558Q9Y6Z2 GPR156-202ENST00000461057 2525 ntAPPRIS ALT1 TSL 1 (best) BASIC7.67□□□□□ -1.18
LINC01558Q9Y6Z2 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms