Protein–RNA interactions for Protein: Q9Y6V7

DDX49, Probable ATP-dependent RNA helicase DDX49, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49Q9Y6V7 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC18.18■□□□□ 0.5
DDX49Q9Y6V7 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC18.18■□□□□ 0.5
DDX49Q9Y6V7 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC18.18■□□□□ 0.5
DDX49Q9Y6V7 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
DDX49Q9Y6V7 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
DDX49Q9Y6V7 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
DDX49Q9Y6V7 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC18.18■□□□□ 0.5
DDX49Q9Y6V7 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
DDX49Q9Y6V7 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC18.18■□□□□ 0.5
DDX49Q9Y6V7 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
DDX49Q9Y6V7 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC18.18■□□□□ 0.5
DDX49Q9Y6V7 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
DDX49Q9Y6V7 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
DDX49Q9Y6V7 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
DDX49Q9Y6V7 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
DDX49Q9Y6V7 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
DDX49Q9Y6V7 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC18.18■□□□□ 0.5
DDX49Q9Y6V7 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
DDX49Q9Y6V7 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
DDX49Q9Y6V7 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
DDX49Q9Y6V7 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
DDX49Q9Y6V7 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC18.17■□□□□ 0.5
DDX49Q9Y6V7 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
DDX49Q9Y6V7 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
DDX49Q9Y6V7 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC18.17■□□□□ 0.5
DDX49Q9Y6V7 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC18.17■□□□□ 0.5
DDX49Q9Y6V7 ACE3P-201ENST00000423435 1973 ntBASIC18.17■□□□□ 0.5
DDX49Q9Y6V7 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
DDX49Q9Y6V7 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
DDX49Q9Y6V7 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC18.17■□□□□ 0.5
DDX49Q9Y6V7 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC18.17■□□□□ 0.5
DDX49Q9Y6V7 AL928921.2-201ENST00000641325 2442 ntBASIC18.17■□□□□ 0.5
DDX49Q9Y6V7 MIR1909-201ENST00000411312 80 ntBASIC18.17■□□□□ 0.5
DDX49Q9Y6V7 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC18.17■□□□□ 0.5
DDX49Q9Y6V7 GPR53P-205ENST00000457298 1084 ntBASIC18.17■□□□□ 0.5
DDX49Q9Y6V7 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC18.17■□□□□ 0.5
DDX49Q9Y6V7 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC18.17■□□□□ 0.5
DDX49Q9Y6V7 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC18.17■□□□□ 0.5
DDX49Q9Y6V7 KRT17P8-201ENST00000540749 863 ntBASIC18.17■□□□□ 0.5
DDX49Q9Y6V7 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC18.17■□□□□ 0.5
DDX49Q9Y6V7 CLK3P2-201ENST00000427566 1453 ntBASIC18.17■□□□□ 0.5
DDX49Q9Y6V7 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
DDX49Q9Y6V7 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
DDX49Q9Y6V7 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
DDX49Q9Y6V7 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
DDX49Q9Y6V7 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC18.17■□□□□ 0.5
DDX49Q9Y6V7 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC18.17■□□□□ 0.5
DDX49Q9Y6V7 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
DDX49Q9Y6V7 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
DDX49Q9Y6V7 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
DDX49Q9Y6V7 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
DDX49Q9Y6V7 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
DDX49Q9Y6V7 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC18.17■□□□□ 0.5
DDX49Q9Y6V7 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC18.17■□□□□ 0.5
DDX49Q9Y6V7 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
DDX49Q9Y6V7 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
DDX49Q9Y6V7 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC18.16■□□□□ 0.5
DDX49Q9Y6V7 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
DDX49Q9Y6V7 GRN-214ENST00000589265 1632 ntTSL 5 BASIC18.16■□□□□ 0.5
DDX49Q9Y6V7 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC18.16■□□□□ 0.5
DDX49Q9Y6V7 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
DDX49Q9Y6V7 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
DDX49Q9Y6V7 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
DDX49Q9Y6V7 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
DDX49Q9Y6V7 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
DDX49Q9Y6V7 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
DDX49Q9Y6V7 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
DDX49Q9Y6V7 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
DDX49Q9Y6V7 AC067750.1-201ENST00000608826 6545 ntBASIC18.16■□□□□ 0.5
DDX49Q9Y6V7 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
DDX49Q9Y6V7 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
DDX49Q9Y6V7 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC18.16■□□□□ 0.5
DDX49Q9Y6V7 TTTY23B-201ENST00000442790 549 ntBASIC18.16■□□□□ 0.5
DDX49Q9Y6V7 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
DDX49Q9Y6V7 FXR1-221ENST00000491674 365 ntTSL 2 BASIC18.16■□□□□ 0.5
DDX49Q9Y6V7 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC18.16■□□□□ 0.5
DDX49Q9Y6V7 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC18.16■□□□□ 0.5
DDX49Q9Y6V7 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC18.16■□□□□ 0.5
DDX49Q9Y6V7 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
DDX49Q9Y6V7 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC18.16■□□□□ 0.5
DDX49Q9Y6V7 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
DDX49Q9Y6V7 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC18.16■□□□□ 0.5
DDX49Q9Y6V7 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
DDX49Q9Y6V7 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
DDX49Q9Y6V7 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
DDX49Q9Y6V7 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC18.16■□□□□ 0.5
DDX49Q9Y6V7 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC18.16■□□□□ 0.5
DDX49Q9Y6V7 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
DDX49Q9Y6V7 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
DDX49Q9Y6V7 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
DDX49Q9Y6V7 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
DDX49Q9Y6V7 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
DDX49Q9Y6V7 WASH3P-207ENST00000560956 1394 ntBASIC18.16■□□□□ 0.5
DDX49Q9Y6V7 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
DDX49Q9Y6V7 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
DDX49Q9Y6V7 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
DDX49Q9Y6V7 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
DDX49Q9Y6V7 AC136759.1-202ENST00000530858 2194 ntBASIC18.15■□□□□ 0.5
DDX49Q9Y6V7 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
DDX49Q9Y6V7 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms