Protein–RNA interactions for Protein: Q9NWW5

CLN6, Ceroid-lipofuscinosis neuronal protein 6, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6Q9NWW5 TNFAIP8L1-201ENST00000327473 3814 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CLN6Q9NWW5 TNFAIP8L1-202ENST00000536716 3845 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
CLN6Q9NWW5 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
CLN6Q9NWW5 HES2-201ENST00000377834 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CLN6Q9NWW5 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
CLN6Q9NWW5 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CLN6Q9NWW5 MVK-214ENST00000629016 1591 ntTSL 5 BASIC13.8□□□□□ -0.2
CLN6Q9NWW5 AP001062.1-201ENST00000448927 4354 ntTSL 2 BASIC13.8□□□□□ -0.2
CLN6Q9NWW5 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CLN6Q9NWW5 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
CLN6Q9NWW5 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC13.8□□□□□ -0.2
CLN6Q9NWW5 WWTR1-203ENST00000465804 5030 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
CLN6Q9NWW5 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CLN6Q9NWW5 RIC1-203ENST00000414202 6774 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
CLN6Q9NWW5 RPS19-201ENST00000221975 500 ntTSL 3 BASIC13.8□□□□□ -0.2
CLN6Q9NWW5 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
CLN6Q9NWW5 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
CLN6Q9NWW5 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
CLN6Q9NWW5 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CLN6Q9NWW5 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC13.8□□□□□ -0.2
CLN6Q9NWW5 MKNK2P1-201ENST00000437526 628 ntBASIC13.8□□□□□ -0.2
CLN6Q9NWW5 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC13.8□□□□□ -0.2
CLN6Q9NWW5 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC13.8□□□□□ -0.2
CLN6Q9NWW5 BANF1P1-201ENST00000553684 263 ntBASIC13.8□□□□□ -0.2
CLN6Q9NWW5 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
CLN6Q9NWW5 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC13.8□□□□□ -0.2
CLN6Q9NWW5 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CLN6Q9NWW5 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CLN6Q9NWW5 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CLN6Q9NWW5 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CLN6Q9NWW5 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
CLN6Q9NWW5 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC13.8□□□□□ -0.2
CLN6Q9NWW5 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
CLN6Q9NWW5 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CLN6Q9NWW5 FAM9C-205ENST00000542843 5858 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CLN6Q9NWW5 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CLN6Q9NWW5 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CLN6Q9NWW5 KIAA1161-201ENST00000297625 6398 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CLN6Q9NWW5 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CLN6Q9NWW5 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CLN6Q9NWW5 GAB2-202ENST00000361507 6092 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CLN6Q9NWW5 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CLN6Q9NWW5 DEK-201ENST00000244776 1441 ntTSL 2 BASIC13.8□□□□□ -0.2
CLN6Q9NWW5 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
CLN6Q9NWW5 VAPA-202ENST00000400000 6815 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CLN6Q9NWW5 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CLN6Q9NWW5 AL354702.1-201ENST00000442006 1960 ntBASIC13.8□□□□□ -0.2
CLN6Q9NWW5 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC13.8□□□□□ -0.2
CLN6Q9NWW5 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CLN6Q9NWW5 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CLN6Q9NWW5 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CLN6Q9NWW5 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC13.79□□□□□ -0.2
CLN6Q9NWW5 AL359183.1-201ENST00000623796 2132 ntBASIC13.79□□□□□ -0.2
CLN6Q9NWW5 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
CLN6Q9NWW5 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CLN6Q9NWW5 AC015712.6-201ENST00000431060 5068 ntTSL 2 BASIC13.79□□□□□ -0.2
CLN6Q9NWW5 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
CLN6Q9NWW5 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CLN6Q9NWW5 ATG14-201ENST00000247178 4742 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CLN6Q9NWW5 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC13.79□□□□□ -0.2
CLN6Q9NWW5 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CLN6Q9NWW5 FASN-201ENST00000306749 8565 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
CLN6Q9NWW5 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC13.79□□□□□ -0.2
CLN6Q9NWW5 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CLN6Q9NWW5 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
CLN6Q9NWW5 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CLN6Q9NWW5 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC13.79□□□□□ -0.2
CLN6Q9NWW5 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
CLN6Q9NWW5 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC13.79□□□□□ -0.2
CLN6Q9NWW5 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC13.79□□□□□ -0.2
CLN6Q9NWW5 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC13.79□□□□□ -0.2
CLN6Q9NWW5 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
CLN6Q9NWW5 ALG1L8P-201ENST00000533887 760 ntBASIC13.79□□□□□ -0.2
CLN6Q9NWW5 KLK8-205ENST00000593490 267 ntTSL 3 BASIC13.79□□□□□ -0.2
CLN6Q9NWW5 AC018529.1-201ENST00000613063 361 ntBASIC13.79□□□□□ -0.2
CLN6Q9NWW5 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC13.79□□□□□ -0.2
CLN6Q9NWW5 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CLN6Q9NWW5 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
CLN6Q9NWW5 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC13.79□□□□□ -0.2
CLN6Q9NWW5 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC13.79□□□□□ -0.2
CLN6Q9NWW5 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
CLN6Q9NWW5 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CLN6Q9NWW5 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC13.79□□□□□ -0.2
CLN6Q9NWW5 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC13.79□□□□□ -0.2
CLN6Q9NWW5 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
CLN6Q9NWW5 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CLN6Q9NWW5 CACNA2D2-204ENST00000424201 5206 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
CLN6Q9NWW5 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CLN6Q9NWW5 IMPDH1P4-201ENST00000445028 1534 ntBASIC13.79□□□□□ -0.2
CLN6Q9NWW5 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC13.79□□□□□ -0.2
CLN6Q9NWW5 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CLN6Q9NWW5 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CLN6Q9NWW5 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
CLN6Q9NWW5 NUDT3-201ENST00000607016 9905 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CLN6Q9NWW5 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CLN6Q9NWW5 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC13.79□□□□□ -0.2
CLN6Q9NWW5 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CLN6Q9NWW5 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
CLN6Q9NWW5 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CLN6Q9NWW5 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC13.78□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 83.4 ms