Protein–RNA interactions for Protein: Q9HBT6

CDH20, Cadherin-20, humanhuman

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20Q9HBT6 RPL28-204ENST00000431533 590 ntTSL 2 BASIC13.22□□□□□ -0.29
CDH20Q9HBT6 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC13.22□□□□□ -0.29
CDH20Q9HBT6 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CDH20Q9HBT6 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CDH20Q9HBT6 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC13.22□□□□□ -0.29
CDH20Q9HBT6 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC13.22□□□□□ -0.29
CDH20Q9HBT6 GIMAP3P-201ENST00000495150 836 ntBASIC13.22□□□□□ -0.29
CDH20Q9HBT6 AC022137.2-201ENST00000503482 481 ntBASIC13.22□□□□□ -0.29
CDH20Q9HBT6 AC022616.1-201ENST00000518688 554 ntBASIC13.22□□□□□ -0.29
CDH20Q9HBT6 RPL28-207ENST00000558815 616 ntTSL 2 BASIC13.22□□□□□ -0.29
CDH20Q9HBT6 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC13.22□□□□□ -0.29
CDH20Q9HBT6 IGHV3-72-202ENST00000621503 303 ntBASIC13.22□□□□□ -0.29
CDH20Q9HBT6 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC13.22□□□□□ -0.29
CDH20Q9HBT6 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CDH20Q9HBT6 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CDH20Q9HBT6 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CDH20Q9HBT6 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
CDH20Q9HBT6 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC13.22□□□□□ -0.29
CDH20Q9HBT6 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CDH20Q9HBT6 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CDH20Q9HBT6 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CDH20Q9HBT6 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC13.22□□□□□ -0.29
CDH20Q9HBT6 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC13.22□□□□□ -0.29
CDH20Q9HBT6 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
CDH20Q9HBT6 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
CDH20Q9HBT6 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC13.22□□□□□ -0.29
CDH20Q9HBT6 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CDH20Q9HBT6 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC13.22□□□□□ -0.29
CDH20Q9HBT6 KRT8P14-201ENST00000414254 1442 ntBASIC13.22□□□□□ -0.29
CDH20Q9HBT6 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC13.22□□□□□ -0.29
CDH20Q9HBT6 SNX18-202ENST00000343017 3140 ntBASIC13.22□□□□□ -0.29
CDH20Q9HBT6 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
CDH20Q9HBT6 ZEB1-AS1-208ENST00000607166 2503 ntBASIC13.21□□□□□ -0.29
CDH20Q9HBT6 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
CDH20Q9HBT6 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC13.21□□□□□ -0.29
CDH20Q9HBT6 JMJD6-208ENST00000617192 5517 ntTSL 5 BASIC13.21□□□□□ -0.29
CDH20Q9HBT6 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
CDH20Q9HBT6 BANP-203ENST00000393207 2438 ntTSL 2 BASIC13.21□□□□□ -0.29
CDH20Q9HBT6 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC13.21□□□□□ -0.29
CDH20Q9HBT6 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CDH20Q9HBT6 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
CDH20Q9HBT6 AP000845.1-201ENST00000581677 2131 ntBASIC13.21□□□□□ -0.29
CDH20Q9HBT6 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
CDH20Q9HBT6 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
CDH20Q9HBT6 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
CDH20Q9HBT6 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC13.21□□□□□ -0.29
CDH20Q9HBT6 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
CDH20Q9HBT6 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
CDH20Q9HBT6 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
CDH20Q9HBT6 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.29
CDH20Q9HBT6 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CDH20Q9HBT6 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC13.21□□□□□ -0.29
CDH20Q9HBT6 TP73-201ENST00000346387 4854 ntTSL 5 BASIC13.21□□□□□ -0.29
CDH20Q9HBT6 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CDH20Q9HBT6 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CDH20Q9HBT6 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
CDH20Q9HBT6 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CDH20Q9HBT6 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
CDH20Q9HBT6 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC13.21□□□□□ -0.29
CDH20Q9HBT6 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CDH20Q9HBT6 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC13.21□□□□□ -0.29
CDH20Q9HBT6 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.29
CDH20Q9HBT6 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC13.21□□□□□ -0.29
CDH20Q9HBT6 GSAP-205ENST00000430584 600 ntTSL 5 BASIC13.21□□□□□ -0.29
CDH20Q9HBT6 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
CDH20Q9HBT6 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC13.21□□□□□ -0.29
CDH20Q9HBT6 AC012441.1-201ENST00000446669 685 ntBASIC13.21□□□□□ -0.29
CDH20Q9HBT6 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
CDH20Q9HBT6 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC13.21□□□□□ -0.29
CDH20Q9HBT6 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
CDH20Q9HBT6 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC13.21□□□□□ -0.29
CDH20Q9HBT6 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC13.21□□□□□ -0.29
CDH20Q9HBT6 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC13.21□□□□□ -0.29
CDH20Q9HBT6 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC13.21□□□□□ -0.29
CDH20Q9HBT6 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC13.21□□□□□ -0.29
CDH20Q9HBT6 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
CDH20Q9HBT6 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
CDH20Q9HBT6 AL035252.4-201ENST00000624174 288 ntBASIC13.21□□□□□ -0.29
CDH20Q9HBT6 PRSS30P-206ENST00000641773 873 ntBASIC13.21□□□□□ -0.29
CDH20Q9HBT6 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC13.21□□□□□ -0.29
CDH20Q9HBT6 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC13.21□□□□□ -0.29
CDH20Q9HBT6 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
CDH20Q9HBT6 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
CDH20Q9HBT6 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC13.21□□□□□ -0.29
CDH20Q9HBT6 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
CDH20Q9HBT6 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
CDH20Q9HBT6 CACNA1C-211ENST00000399617 7482 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
CDH20Q9HBT6 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
CDH20Q9HBT6 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC13.21□□□□□ -0.29
CDH20Q9HBT6 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
CDH20Q9HBT6 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
CDH20Q9HBT6 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
CDH20Q9HBT6 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.3
CDH20Q9HBT6 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
CDH20Q9HBT6 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
CDH20Q9HBT6 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC13.21□□□□□ -0.3
CDH20Q9HBT6 OAS3-201ENST00000228928 6719 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
CDH20Q9HBT6 REXO1L5P-201ENST00000622260 2098 ntBASIC13.2□□□□□ -0.3
CDH20Q9HBT6 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC13.2□□□□□ -0.3
CDH20Q9HBT6 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 55.9 ms