Protein–RNA interactions for Protein: Q9BU40

CHRDL1, Chordin-like protein 1, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL1Q9BU40 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC12.06□□□□□ -0.48
CHRDL1Q9BU40 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CHRDL1Q9BU40 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
CHRDL1Q9BU40 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC12.06□□□□□ -0.48
CHRDL1Q9BU40 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
CHRDL1Q9BU40 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
CHRDL1Q9BU40 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC12.06□□□□□ -0.48
CHRDL1Q9BU40 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
CHRDL1Q9BU40 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CHRDL1Q9BU40 AC092053.3-201ENST00000641308 4975 ntBASIC12.06□□□□□ -0.48
CHRDL1Q9BU40 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CHRDL1Q9BU40 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC12.05□□□□□ -0.48
CHRDL1Q9BU40 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC12.05□□□□□ -0.48
CHRDL1Q9BU40 CDH1-201ENST00000261769 4889 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CHRDL1Q9BU40 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
CHRDL1Q9BU40 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CHRDL1Q9BU40 USP31-203ENST00000567975 2142 ntTSL 2 BASIC12.05□□□□□ -0.48
CHRDL1Q9BU40 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CHRDL1Q9BU40 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
CHRDL1Q9BU40 USP19-208ENST00000453664 4719 ntAPPRIS ALT2 TSL 2 BASIC12.05□□□□□ -0.48
CHRDL1Q9BU40 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
CHRDL1Q9BU40 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC12.05□□□□□ -0.48
CHRDL1Q9BU40 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
CHRDL1Q9BU40 RGS12-204ENST00000382788 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
CHRDL1Q9BU40 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
CHRDL1Q9BU40 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
CHRDL1Q9BU40 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
CHRDL1Q9BU40 TRAPPC10-201ENST00000291574 6976 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CHRDL1Q9BU40 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
CHRDL1Q9BU40 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CHRDL1Q9BU40 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC12.05□□□□□ -0.48
CHRDL1Q9BU40 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
CHRDL1Q9BU40 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
CHRDL1Q9BU40 RDX-218ENST00000544551 4117 ntTSL 2 BASIC12.05□□□□□ -0.48
CHRDL1Q9BU40 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC12.05□□□□□ -0.48
CHRDL1Q9BU40 CSPG4P11-201ENST00000560634 4910 ntBASIC12.05□□□□□ -0.48
CHRDL1Q9BU40 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
CHRDL1Q9BU40 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CHRDL1Q9BU40 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC12.05□□□□□ -0.48
CHRDL1Q9BU40 IKZF1-204ENST00000349824 5757 ntTSL 5 BASIC12.05□□□□□ -0.48
CHRDL1Q9BU40 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
CHRDL1Q9BU40 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
CHRDL1Q9BU40 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC12.05□□□□□ -0.48
CHRDL1Q9BU40 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC12.05□□□□□ -0.48
CHRDL1Q9BU40 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
CHRDL1Q9BU40 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
CHRDL1Q9BU40 AL133267.1-201ENST00000398220 340 ntBASIC12.05□□□□□ -0.48
CHRDL1Q9BU40 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC12.05□□□□□ -0.48
CHRDL1Q9BU40 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC12.05□□□□□ -0.48
CHRDL1Q9BU40 TOMM22P5-201ENST00000416399 439 ntBASIC12.05□□□□□ -0.48
CHRDL1Q9BU40 TSSK5P-201ENST00000423978 907 ntBASIC12.05□□□□□ -0.48
CHRDL1Q9BU40 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CHRDL1Q9BU40 AC055876.3-201ENST00000431496 288 ntBASIC12.05□□□□□ -0.48
CHRDL1Q9BU40 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC12.05□□□□□ -0.48
CHRDL1Q9BU40 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC12.05□□□□□ -0.48
CHRDL1Q9BU40 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC12.05□□□□□ -0.48
CHRDL1Q9BU40 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC12.05□□□□□ -0.48
CHRDL1Q9BU40 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC12.05□□□□□ -0.48
CHRDL1Q9BU40 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
CHRDL1Q9BU40 ZNF890P-202ENST00000530367 1156 ntBASIC12.05□□□□□ -0.48
CHRDL1Q9BU40 RAB35-202ENST00000534951 939 ntTSL 2 BASIC12.05□□□□□ -0.48
CHRDL1Q9BU40 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
CHRDL1Q9BU40 UBL5-208ENST00000593087 320 ntTSL 3 BASIC12.05□□□□□ -0.48
CHRDL1Q9BU40 AC138649.4-201ENST00000612222 287 ntBASIC12.05□□□□□ -0.48
CHRDL1Q9BU40 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
CHRDL1Q9BU40 MMAB-210ENST00000545712 4438 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CHRDL1Q9BU40 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC12.05□□□□□ -0.48
CHRDL1Q9BU40 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC12.05□□□□□ -0.48
CHRDL1Q9BU40 CFAP74-209ENST00000493964 5247 ntAPPRIS P5 TSL 5 BASIC12.05□□□□□ -0.48
CHRDL1Q9BU40 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
CHRDL1Q9BU40 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC12.05□□□□□ -0.48
CHRDL1Q9BU40 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC12.05□□□□□ -0.48
CHRDL1Q9BU40 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CHRDL1Q9BU40 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
CHRDL1Q9BU40 COLGALT1-201ENST00000252599 3704 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
CHRDL1Q9BU40 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
CHRDL1Q9BU40 RIC1-203ENST00000414202 6774 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
CHRDL1Q9BU40 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC12.05□□□□□ -0.48
CHRDL1Q9BU40 AL121723.1-201ENST00000445194 1519 ntBASIC12.05□□□□□ -0.48
CHRDL1Q9BU40 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC12.05□□□□□ -0.48
CHRDL1Q9BU40 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC12.05□□□□□ -0.48
CHRDL1Q9BU40 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
CHRDL1Q9BU40 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CHRDL1Q9BU40 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CHRDL1Q9BU40 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC12.05□□□□□ -0.48
CHRDL1Q9BU40 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC12.05□□□□□ -0.48
CHRDL1Q9BU40 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CHRDL1Q9BU40 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC12.05□□□□□ -0.48
CHRDL1Q9BU40 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC12.04□□□□□ -0.48
CHRDL1Q9BU40 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC12.04□□□□□ -0.48
CHRDL1Q9BU40 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CHRDL1Q9BU40 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC12.04□□□□□ -0.48
CHRDL1Q9BU40 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CHRDL1Q9BU40 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
CHRDL1Q9BU40 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC12.04□□□□□ -0.48
CHRDL1Q9BU40 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
CHRDL1Q9BU40 TP73-209ENST00000603362 1668 ntTSL 5 BASIC12.04□□□□□ -0.48
CHRDL1Q9BU40 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
CHRDL1Q9BU40 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC12.04□□□□□ -0.48
CHRDL1Q9BU40 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC12.04□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 54.8 ms