Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC12.76□□□□□ -0.37
HDHD3Q9BSH5 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
HDHD3Q9BSH5 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC12.76□□□□□ -0.37
HDHD3Q9BSH5 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
HDHD3Q9BSH5 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
HDHD3Q9BSH5 API5-203ENST00000455725 2257 ntTSL 2 BASIC12.76□□□□□ -0.37
HDHD3Q9BSH5 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
HDHD3Q9BSH5 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
HDHD3Q9BSH5 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
HDHD3Q9BSH5 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
HDHD3Q9BSH5 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
HDHD3Q9BSH5 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC12.75□□□□□ -0.37
HDHD3Q9BSH5 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
HDHD3Q9BSH5 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
HDHD3Q9BSH5 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
HDHD3Q9BSH5 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC12.75□□□□□ -0.37
HDHD3Q9BSH5 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC12.75□□□□□ -0.37
HDHD3Q9BSH5 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
HDHD3Q9BSH5 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
HDHD3Q9BSH5 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
HDHD3Q9BSH5 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
HDHD3Q9BSH5 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
HDHD3Q9BSH5 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
HDHD3Q9BSH5 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
HDHD3Q9BSH5 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
HDHD3Q9BSH5 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
HDHD3Q9BSH5 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
HDHD3Q9BSH5 PKIG-203ENST00000372887 769 ntTSL 3 BASIC12.75□□□□□ -0.37
HDHD3Q9BSH5 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
HDHD3Q9BSH5 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
HDHD3Q9BSH5 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
HDHD3Q9BSH5 WRB-204ENST00000398753 699 ntTSL 3 BASIC12.75□□□□□ -0.37
HDHD3Q9BSH5 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
HDHD3Q9BSH5 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC12.75□□□□□ -0.37
HDHD3Q9BSH5 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC12.75□□□□□ -0.37
HDHD3Q9BSH5 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
HDHD3Q9BSH5 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
HDHD3Q9BSH5 CNN2P2-201ENST00000443536 909 ntBASIC12.75□□□□□ -0.37
HDHD3Q9BSH5 AP006288.1-201ENST00000446065 395 ntBASIC12.75□□□□□ -0.37
HDHD3Q9BSH5 CNN2P3-201ENST00000450201 906 ntBASIC12.75□□□□□ -0.37
HDHD3Q9BSH5 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
HDHD3Q9BSH5 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
HDHD3Q9BSH5 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC12.75□□□□□ -0.37
HDHD3Q9BSH5 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
HDHD3Q9BSH5 HLA-J-203ENST00000494367 1087 ntBASIC12.75□□□□□ -0.37
HDHD3Q9BSH5 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC12.75□□□□□ -0.37
HDHD3Q9BSH5 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC12.75□□□□□ -0.37
HDHD3Q9BSH5 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC12.75□□□□□ -0.37
HDHD3Q9BSH5 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC12.75□□□□□ -0.37
HDHD3Q9BSH5 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
HDHD3Q9BSH5 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC12.75□□□□□ -0.37
HDHD3Q9BSH5 RERG-209ENST00000546331 1383 ntTSL 2 BASIC12.75□□□□□ -0.37
HDHD3Q9BSH5 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC12.75□□□□□ -0.37
HDHD3Q9BSH5 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
HDHD3Q9BSH5 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC12.75□□□□□ -0.37
HDHD3Q9BSH5 INO80C-210ENST00000590757 595 ntTSL 2 BASIC12.75□□□□□ -0.37
HDHD3Q9BSH5 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC12.75□□□□□ -0.37
HDHD3Q9BSH5 AL136317.3-201ENST00000618497 906 ntBASIC12.75□□□□□ -0.37
HDHD3Q9BSH5 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
HDHD3Q9BSH5 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC12.75□□□□□ -0.37
HDHD3Q9BSH5 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC12.75□□□□□ -0.37
HDHD3Q9BSH5 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
HDHD3Q9BSH5 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC12.75□□□□□ -0.37
HDHD3Q9BSH5 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
HDHD3Q9BSH5 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
HDHD3Q9BSH5 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
HDHD3Q9BSH5 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
HDHD3Q9BSH5 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC12.75□□□□□ -0.37
HDHD3Q9BSH5 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC12.75□□□□□ -0.37
HDHD3Q9BSH5 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
HDHD3Q9BSH5 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
HDHD3Q9BSH5 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
HDHD3Q9BSH5 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC12.74□□□□□ -0.37
HDHD3Q9BSH5 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC12.74□□□□□ -0.37
HDHD3Q9BSH5 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
HDHD3Q9BSH5 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
HDHD3Q9BSH5 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC12.74□□□□□ -0.37
HDHD3Q9BSH5 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC12.74□□□□□ -0.37
HDHD3Q9BSH5 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
HDHD3Q9BSH5 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC12.74□□□□□ -0.37
HDHD3Q9BSH5 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC12.74□□□□□ -0.37
HDHD3Q9BSH5 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
HDHD3Q9BSH5 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
HDHD3Q9BSH5 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
HDHD3Q9BSH5 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC12.74□□□□□ -0.37
HDHD3Q9BSH5 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC12.74□□□□□ -0.37
HDHD3Q9BSH5 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC12.74□□□□□ -0.37
HDHD3Q9BSH5 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
HDHD3Q9BSH5 SRC-202ENST00000373558 4304 ntTSL 5 BASIC12.74□□□□□ -0.37
HDHD3Q9BSH5 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
HDHD3Q9BSH5 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC12.74□□□□□ -0.37
HDHD3Q9BSH5 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
HDHD3Q9BSH5 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
HDHD3Q9BSH5 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
HDHD3Q9BSH5 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC12.74□□□□□ -0.37
HDHD3Q9BSH5 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
HDHD3Q9BSH5 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
HDHD3Q9BSH5 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
HDHD3Q9BSH5 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
HDHD3Q9BSH5 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC12.74□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 56.2 ms