Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PHOX2BQ99453 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC15.29■□□□□ 0.04
PHOX2BQ99453 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PHOX2BQ99453 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PHOX2BQ99453 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
PHOX2BQ99453 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
PHOX2BQ99453 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PHOX2BQ99453 BNIP3P1-202ENST00000550043 1585 ntBASIC15.28■□□□□ 0.04
PHOX2BQ99453 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
PHOX2BQ99453 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PHOX2BQ99453 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PHOX2BQ99453 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
PHOX2BQ99453 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
PHOX2BQ99453 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
PHOX2BQ99453 APBB3-205ENST00000412920 1455 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PHOX2BQ99453 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
PHOX2BQ99453 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PHOX2BQ99453 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PHOX2BQ99453 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
PHOX2BQ99453 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
PHOX2BQ99453 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
PHOX2BQ99453 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
PHOX2BQ99453 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
PHOX2BQ99453 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
PHOX2BQ99453 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
PHOX2BQ99453 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PHOX2BQ99453 BTG3P1-201ENST00000435859 716 ntBASIC15.28■□□□□ 0.04
PHOX2BQ99453 AP003171.2-201ENST00000528208 925 ntBASIC15.28■□□□□ 0.04
PHOX2BQ99453 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC15.28■□□□□ 0.04
PHOX2BQ99453 AL160314.3-201ENST00000556041 767 ntBASIC15.28■□□□□ 0.04
PHOX2BQ99453 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC15.28■□□□□ 0.04
PHOX2BQ99453 TMEM231-206ENST00000565067 1078 ntTSL 5 BASIC15.28■□□□□ 0.04
PHOX2BQ99453 DCTPP1-202ENST00000565758 749 ntTSL 3 BASIC15.28■□□□□ 0.04
PHOX2BQ99453 AC079414.2-201ENST00000567157 1104 ntBASIC15.28■□□□□ 0.04
PHOX2BQ99453 AC103808.3-201ENST00000579714 598 ntTSL 5 BASIC15.28■□□□□ 0.04
PHOX2BQ99453 NAT9-211ENST00000580632 799 ntTSL 3 BASIC15.28■□□□□ 0.04
PHOX2BQ99453 METTL23-207ENST00000588783 1184 ntTSL 5 BASIC15.28■□□□□ 0.04
PHOX2BQ99453 OR10B1P-201ENST00000601666 907 ntBASIC15.28■□□□□ 0.04
PHOX2BQ99453 AC011247.3-201ENST00000603297 438 ntBASIC15.28■□□□□ 0.04
PHOX2BQ99453 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PHOX2BQ99453 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC15.28■□□□□ 0.04
PHOX2BQ99453 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PHOX2BQ99453 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC15.28■□□□□ 0.04
PHOX2BQ99453 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC15.28■□□□□ 0.04
PHOX2BQ99453 GGT4P-201ENST00000623672 1708 ntBASIC15.28■□□□□ 0.04
PHOX2BQ99453 AL138799.1-201ENST00000448213 1675 ntBASIC15.28■□□□□ 0.04
PHOX2BQ99453 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PHOX2BQ99453 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC15.28■□□□□ 0.04
PHOX2BQ99453 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC15.28■□□□□ 0.04
PHOX2BQ99453 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
PHOX2BQ99453 ACE-204ENST00000428043 5120 ntTSL 2 BASIC15.28■□□□□ 0.04
PHOX2BQ99453 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
PHOX2BQ99453 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
PHOX2BQ99453 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
PHOX2BQ99453 PCNA-202ENST00000379160 1359 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
PHOX2BQ99453 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
PHOX2BQ99453 CAP2P1-201ENST00000557743 1390 ntBASIC15.27■□□□□ 0.04
PHOX2BQ99453 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC15.27■□□□□ 0.04
PHOX2BQ99453 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC15.27■□□□□ 0.04
PHOX2BQ99453 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC15.27■□□□□ 0.04
PHOX2BQ99453 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
PHOX2BQ99453 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PHOX2BQ99453 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
PHOX2BQ99453 NHP2-202ENST00000314397 599 ntTSL 2 BASIC15.27■□□□□ 0.04
PHOX2BQ99453 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
PHOX2BQ99453 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
PHOX2BQ99453 RPS20P25-201ENST00000412447 352 ntBASIC15.27■□□□□ 0.04
PHOX2BQ99453 IZUMO1R-202ENST00000440961 805 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
PHOX2BQ99453 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC15.27■□□□□ 0.04
PHOX2BQ99453 AL139353.2-202ENST00000502430 1213 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
PHOX2BQ99453 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC15.27■□□□□ 0.04
PHOX2BQ99453 IGHEP1-201ENST00000521393 651 ntBASIC15.27■□□□□ 0.04
PHOX2BQ99453 AC091564.6-201ENST00000526633 487 ntTSL 3 BASIC15.27■□□□□ 0.04
PHOX2BQ99453 AC093330.1-206ENST00000582546 812 ntTSL 3 BASIC15.27■□□□□ 0.04
PHOX2BQ99453 AC009264.1-206ENST00000592183 534 ntTSL 4 BASIC15.27■□□□□ 0.04
PHOX2BQ99453 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
PHOX2BQ99453 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
PHOX2BQ99453 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
PHOX2BQ99453 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
PHOX2BQ99453 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC15.27■□□□□ 0.03
PHOX2BQ99453 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC15.27■□□□□ 0.03
PHOX2BQ99453 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
PHOX2BQ99453 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
PHOX2BQ99453 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
PHOX2BQ99453 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
PHOX2BQ99453 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC15.27■□□□□ 0.03
PHOX2BQ99453 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
PHOX2BQ99453 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
PHOX2BQ99453 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC15.27■□□□□ 0.03
PHOX2BQ99453 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
PHOX2BQ99453 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC15.27■□□□□ 0.03
PHOX2BQ99453 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
PHOX2BQ99453 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
PHOX2BQ99453 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PHOX2BQ99453 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PHOX2BQ99453 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PHOX2BQ99453 AC148477.4-201ENST00000613430 1793 ntBASIC15.26■□□□□ 0.03
PHOX2BQ99453 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PHOX2BQ99453 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
PHOX2BQ99453 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 73.6 ms