Protein–RNA interactions for Protein: Q8NHG7

SVIP, Small VCP/p97-interacting protein, humanhuman

Predictions only

Length 77 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SVIPQ8NHG7 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
SVIPQ8NHG7 GKN2-202ENST00000481498 1498 ntTSL 2 BASIC9.07□□□□□ -0.96
SVIPQ8NHG7 SEC61A1-201ENST00000243253 3635 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
SVIPQ8NHG7 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
SVIPQ8NHG7 ALAS1-205ENST00000484952 2356 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
SVIPQ8NHG7 PCDHGA5-201ENST00000518069 4602 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
SVIPQ8NHG7 ZC3H13-202ENST00000282007 6412 ntAPPRIS P3 TSL 1 (best) BASIC9.07□□□□□ -0.96
SVIPQ8NHG7 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
SVIPQ8NHG7 AL031676.1-201ENST00000412519 1586 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
SVIPQ8NHG7 NR2F1-AS1-213ENST00000607797 3380 ntTSL 2 BASIC9.07□□□□□ -0.96
SVIPQ8NHG7 FAM212B-AS1-201ENST00000430373 2131 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
SVIPQ8NHG7 ZNF124-201ENST00000340684 1674 ntAPPRIS P3 TSL 1 (best) BASIC9.07□□□□□ -0.96
SVIPQ8NHG7 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC9.07□□□□□ -0.96
SVIPQ8NHG7 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC9.07□□□□□ -0.96
SVIPQ8NHG7 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC9.07□□□□□ -0.96
SVIPQ8NHG7 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC9.07□□□□□ -0.96
SVIPQ8NHG7 ZNF571-AS1-201ENST00000585578 2777 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
SVIPQ8NHG7 CHEK1-206ENST00000524737 1799 ntAPPRIS P1 TSL 5 BASIC9.07□□□□□ -0.96
SVIPQ8NHG7 RASGRP4-219ENST00000618320 3313 ntTSL 2 BASIC9.06□□□□□ -0.96
SVIPQ8NHG7 POU6F2-201ENST00000403058 2335 ntTSL 5 BASIC9.06□□□□□ -0.96
SVIPQ8NHG7 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
SVIPQ8NHG7 AC110615.1-201ENST00000438151 1955 ntBASIC9.06□□□□□ -0.96
SVIPQ8NHG7 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
SVIPQ8NHG7 SCHLAP1-201ENST00000629145 1436 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
SVIPQ8NHG7 REV3L-202ENST00000368802 10701 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
SVIPQ8NHG7 MRPL48-201ENST00000310614 1536 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
SVIPQ8NHG7 RIMKLA-202ENST00000431473 8909 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
SVIPQ8NHG7 PTPRN2-202ENST00000389416 4692 ntAPPRIS ALT2 TSL 1 (best) BASIC9.06□□□□□ -0.96
SVIPQ8NHG7 MTHFR-202ENST00000376583 7044 ntAPPRIS ALT1 TSL 5 BASIC9.06□□□□□ -0.96
SVIPQ8NHG7 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
SVIPQ8NHG7 ZNF773-205ENST00000599847 5832 ntTSL 2 BASIC9.06□□□□□ -0.96
SVIPQ8NHG7 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
SVIPQ8NHG7 EI24-213ENST00000618552 1747 ntTSL 5 BASIC9.06□□□□□ -0.96
SVIPQ8NHG7 PRAMEF8-203ENST00000621519 1706 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
SVIPQ8NHG7 GTF3C2-201ENST00000264720 3882 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
SVIPQ8NHG7 ARHGAP30-202ENST00000368015 3887 ntTSL 5 BASIC9.06□□□□□ -0.96
SVIPQ8NHG7 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC9.06□□□□□ -0.96
SVIPQ8NHG7 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
SVIPQ8NHG7 BMX-203ENST00000357607 2598 ntAPPRIS P1 TSL 2 BASIC9.06□□□□□ -0.96
SVIPQ8NHG7 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC9.06□□□□□ -0.96
SVIPQ8NHG7 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
SVIPQ8NHG7 HOXA-AS2-201ENST00000517550 2022 ntTSL 2 BASIC9.06□□□□□ -0.96
SVIPQ8NHG7 PTCHD4-201ENST00000339488 2850 ntAPPRIS P1 TSL 2 BASIC9.06□□□□□ -0.96
SVIPQ8NHG7 EIF3C-204ENST00000564243 2870 ntTSL 2 BASIC9.06□□□□□ -0.96
SVIPQ8NHG7 RECQL5-201ENST00000317905 3704 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
SVIPQ8NHG7 FAM122C-203ENST00000414371 2119 ntAPPRIS ALT2 TSL 5 BASIC9.06□□□□□ -0.96
SVIPQ8NHG7 MTND6P1-201ENST00000417434 424 ntBASIC9.06□□□□□ -0.96
SVIPQ8NHG7 NPM1P51-201ENST00000443470 744 ntBASIC9.06□□□□□ -0.96
SVIPQ8NHG7 MRPS14-202ENST00000476371 2115 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
SVIPQ8NHG7 AC097372.1-201ENST00000636502 2127 ntAPPRIS P1 TSL 5 BASIC9.06□□□□□ -0.96
SVIPQ8NHG7 RC3H2-201ENST00000335387 3081 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
SVIPQ8NHG7 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
SVIPQ8NHG7 COLEC11-201ENST00000236693 1381 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
SVIPQ8NHG7 DGKH-202ENST00000337343 4246 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
SVIPQ8NHG7 TTC31-202ENST00000410003 3358 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
SVIPQ8NHG7 BAHD1-201ENST00000416165 4526 ntAPPRIS P3 TSL 1 (best) BASIC9.06□□□□□ -0.96
SVIPQ8NHG7 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC9.06□□□□□ -0.96
SVIPQ8NHG7 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC9.06□□□□□ -0.96
SVIPQ8NHG7 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC9.06□□□□□ -0.96
SVIPQ8NHG7 AL162615.1-201ENST00000429893 1653 ntBASIC9.06□□□□□ -0.96
SVIPQ8NHG7 KRIT1-202ENST00000394503 2827 ntTSL 2 BASIC9.06□□□□□ -0.96
SVIPQ8NHG7 ZNF564-201ENST00000339282 2935 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
SVIPQ8NHG7 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
SVIPQ8NHG7 ZFYVE27-206ENST00000393677 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC9.06□□□□□ -0.96
SVIPQ8NHG7 RAPGEF6-209ENST00000510071 3107 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
SVIPQ8NHG7 AL136115.3-201ENST00000641788 1873 ntBASIC9.06□□□□□ -0.96
SVIPQ8NHG7 ADH4-209ENST00000508393 2151 ntTSL 2 BASIC9.06□□□□□ -0.96
SVIPQ8NHG7 MYO1D-202ENST00000394649 5451 ntTSL 5 BASIC9.06□□□□□ -0.96
SVIPQ8NHG7 LY9-203ENST00000368037 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC9.06□□□□□ -0.96
SVIPQ8NHG7 MAPK10-361ENST00000641862 2462 ntBASIC9.06□□□□□ -0.96
SVIPQ8NHG7 HTR4-203ENST00000377888 2962 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
SVIPQ8NHG7 CCDC69-201ENST00000355417 3451 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
SVIPQ8NHG7 ABCC5-202ENST00000334444 5921 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
SVIPQ8NHG7 IGHMBP2-201ENST00000255078 3961 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
SVIPQ8NHG7 PATE3-201ENST00000445202 1336 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
SVIPQ8NHG7 AP001189.1-201ENST00000447519 1426 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
SVIPQ8NHG7 FAIM2-201ENST00000320634 4654 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
SVIPQ8NHG7 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
SVIPQ8NHG7 AC003684.1-201ENST00000432442 1715 ntTSL 2 BASIC9.05□□□□□ -0.96
SVIPQ8NHG7 AC121338.2-201ENST00000622535 1744 ntBASIC9.05□□□□□ -0.96
SVIPQ8NHG7 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC9.05□□□□□ -0.96
SVIPQ8NHG7 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC9.05□□□□□ -0.96
SVIPQ8NHG7 AC011481.3-201ENST00000623895 5594 ntBASIC9.05□□□□□ -0.96
SVIPQ8NHG7 AC092999.1-201ENST00000624004 1924 ntBASIC9.05□□□□□ -0.96
SVIPQ8NHG7 LINC00501-201ENST00000425388 2046 ntTSL 2 BASIC9.05□□□□□ -0.96
SVIPQ8NHG7 AC068189.1-201ENST00000501164 2632 ntTSL 2 BASIC9.05□□□□□ -0.96
SVIPQ8NHG7 CAPZA1-201ENST00000263168 3020 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
SVIPQ8NHG7 ZEB2-239ENST00000637045 9091 ntTSL 5 BASIC9.05□□□□□ -0.96
SVIPQ8NHG7 STXBP1-221ENST00000637953 3925 ntTSL 5 BASIC9.05□□□□□ -0.96
SVIPQ8NHG7 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
SVIPQ8NHG7 PRRG4-201ENST00000257836 5530 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
SVIPQ8NHG7 HAUS6-202ENST00000380502 6536 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
SVIPQ8NHG7 BTAF1-201ENST00000265990 7250 ntAPPRIS P2 TSL 1 (best) BASIC9.05□□□□□ -0.96
SVIPQ8NHG7 TACC2-209ENST00000369004 3667 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
SVIPQ8NHG7 ABRA-201ENST00000311955 2755 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
SVIPQ8NHG7 MARK2P4-201ENST00000503381 2380 ntBASIC9.05□□□□□ -0.96
SVIPQ8NHG7 CFAP52-201ENST00000352665 2193 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
SVIPQ8NHG7 SNAP25-201ENST00000254976 2053 ntAPPRIS P5 TSL 1 (best) BASIC9.05□□□□□ -0.96
SVIPQ8NHG7 AL445309.1-201ENST00000607565 1989 ntBASIC9.05□□□□□ -0.96
SVIPQ8NHG7 PTCHD1-201ENST00000379361 13714 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Retrieved 100 of 98,524 protein–RNA pairs in 63.2 ms