Protein–RNA interactions for Protein: Q8NFJ9

BBS1, Bardet-Biedl syndrome 1 protein, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BBS1Q8NFJ9 AC004461.2-201ENST00000629517 803 ntBASIC13.59□□□□□ -0.23
BBS1Q8NFJ9 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC13.59□□□□□ -0.23
BBS1Q8NFJ9 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
BBS1Q8NFJ9 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
BBS1Q8NFJ9 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
BBS1Q8NFJ9 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
BBS1Q8NFJ9 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
BBS1Q8NFJ9 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
BBS1Q8NFJ9 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
BBS1Q8NFJ9 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
BBS1Q8NFJ9 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
BBS1Q8NFJ9 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC13.59□□□□□ -0.23
BBS1Q8NFJ9 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
BBS1Q8NFJ9 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
BBS1Q8NFJ9 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
BBS1Q8NFJ9 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
BBS1Q8NFJ9 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC13.59□□□□□ -0.23
BBS1Q8NFJ9 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC13.59□□□□□ -0.23
BBS1Q8NFJ9 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC13.59□□□□□ -0.23
BBS1Q8NFJ9 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.23
BBS1Q8NFJ9 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
BBS1Q8NFJ9 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC13.58□□□□□ -0.23
BBS1Q8NFJ9 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.23
BBS1Q8NFJ9 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC13.58□□□□□ -0.23
BBS1Q8NFJ9 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.23
BBS1Q8NFJ9 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
BBS1Q8NFJ9 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.23
BBS1Q8NFJ9 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
BBS1Q8NFJ9 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
BBS1Q8NFJ9 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
BBS1Q8NFJ9 AC089987.1-201ENST00000551654 2209 ntBASIC13.58□□□□□ -0.24
BBS1Q8NFJ9 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
BBS1Q8NFJ9 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
BBS1Q8NFJ9 COX10-202ENST00000429152 875 ntTSL 2 BASIC13.58□□□□□ -0.24
BBS1Q8NFJ9 HLA-K-203ENST00000430151 1046 ntBASIC13.58□□□□□ -0.24
BBS1Q8NFJ9 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC13.58□□□□□ -0.24
BBS1Q8NFJ9 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
BBS1Q8NFJ9 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC13.58□□□□□ -0.24
BBS1Q8NFJ9 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC13.58□□□□□ -0.24
BBS1Q8NFJ9 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC13.58□□□□□ -0.24
BBS1Q8NFJ9 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
BBS1Q8NFJ9 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC13.58□□□□□ -0.24
BBS1Q8NFJ9 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
BBS1Q8NFJ9 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC13.58□□□□□ -0.24
BBS1Q8NFJ9 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC13.58□□□□□ -0.24
BBS1Q8NFJ9 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
BBS1Q8NFJ9 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
BBS1Q8NFJ9 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC13.58□□□□□ -0.24
BBS1Q8NFJ9 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC13.58□□□□□ -0.24
BBS1Q8NFJ9 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
BBS1Q8NFJ9 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
BBS1Q8NFJ9 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
BBS1Q8NFJ9 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
BBS1Q8NFJ9 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
BBS1Q8NFJ9 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.24
BBS1Q8NFJ9 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
BBS1Q8NFJ9 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
BBS1Q8NFJ9 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
BBS1Q8NFJ9 NIN-202ENST00000324330 4364 ntTSL 5 BASIC13.58□□□□□ -0.24
BBS1Q8NFJ9 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
BBS1Q8NFJ9 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
BBS1Q8NFJ9 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC13.58□□□□□ -0.24
BBS1Q8NFJ9 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC13.58□□□□□ -0.24
BBS1Q8NFJ9 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
BBS1Q8NFJ9 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
BBS1Q8NFJ9 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
BBS1Q8NFJ9 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC13.57□□□□□ -0.24
BBS1Q8NFJ9 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
BBS1Q8NFJ9 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC13.57□□□□□ -0.24
BBS1Q8NFJ9 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC13.57□□□□□ -0.24
BBS1Q8NFJ9 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
BBS1Q8NFJ9 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
BBS1Q8NFJ9 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
BBS1Q8NFJ9 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
BBS1Q8NFJ9 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
BBS1Q8NFJ9 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
BBS1Q8NFJ9 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC13.57□□□□□ -0.24
BBS1Q8NFJ9 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
BBS1Q8NFJ9 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
BBS1Q8NFJ9 MBLAC2-202ENST00000514906 1936 ntBASIC13.57□□□□□ -0.24
BBS1Q8NFJ9 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
BBS1Q8NFJ9 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC13.57□□□□□ -0.24
BBS1Q8NFJ9 AC138969.2-201ENST00000532739 9932 ntBASIC13.57□□□□□ -0.24
BBS1Q8NFJ9 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
BBS1Q8NFJ9 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
BBS1Q8NFJ9 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
BBS1Q8NFJ9 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC13.57□□□□□ -0.24
BBS1Q8NFJ9 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
BBS1Q8NFJ9 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC13.57□□□□□ -0.24
BBS1Q8NFJ9 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
BBS1Q8NFJ9 UPF3AP3-201ENST00000420996 769 ntBASIC13.57□□□□□ -0.24
BBS1Q8NFJ9 CNN2P11-201ENST00000429351 262 ntBASIC13.57□□□□□ -0.24
BBS1Q8NFJ9 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC13.57□□□□□ -0.24
BBS1Q8NFJ9 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC13.57□□□□□ -0.24
BBS1Q8NFJ9 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC13.57□□□□□ -0.24
BBS1Q8NFJ9 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC13.57□□□□□ -0.24
BBS1Q8NFJ9 DHDH-204ENST00000523250 634 ntTSL 5 BASIC13.57□□□□□ -0.24
BBS1Q8NFJ9 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC13.57□□□□□ -0.24
BBS1Q8NFJ9 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC13.57□□□□□ -0.24
BBS1Q8NFJ9 DAD1-205ENST00000543337 501 ntTSL 3 BASIC13.57□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms