Protein–RNA interactions for Protein: Q8N7P3

CLDN22, Claudin-22, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN22Q8N7P3 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CLDN22Q8N7P3 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CLDN22Q8N7P3 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC13.76□□□□□ -0.21
CLDN22Q8N7P3 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
CLDN22Q8N7P3 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC13.76□□□□□ -0.21
CLDN22Q8N7P3 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC13.76□□□□□ -0.21
CLDN22Q8N7P3 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CLDN22Q8N7P3 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CLDN22Q8N7P3 AL645937.2-201ENST00000396808 931 ntBASIC13.76□□□□□ -0.21
CLDN22Q8N7P3 MPV17-208ENST00000405076 603 ntTSL 5 BASIC13.76□□□□□ -0.21
CLDN22Q8N7P3 AC114501.2-201ENST00000439631 535 ntBASIC13.76□□□□□ -0.21
CLDN22Q8N7P3 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC13.76□□□□□ -0.21
CLDN22Q8N7P3 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC13.76□□□□□ -0.21
CLDN22Q8N7P3 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC13.76□□□□□ -0.21
CLDN22Q8N7P3 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CLDN22Q8N7P3 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC13.76□□□□□ -0.21
CLDN22Q8N7P3 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CLDN22Q8N7P3 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC13.76□□□□□ -0.21
CLDN22Q8N7P3 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC13.76□□□□□ -0.21
CLDN22Q8N7P3 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC13.76□□□□□ -0.21
CLDN22Q8N7P3 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CLDN22Q8N7P3 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC13.76□□□□□ -0.21
CLDN22Q8N7P3 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC13.76□□□□□ -0.21
CLDN22Q8N7P3 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CLDN22Q8N7P3 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
CLDN22Q8N7P3 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CLDN22Q8N7P3 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CLDN22Q8N7P3 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
CLDN22Q8N7P3 PES1-204ENST00000402284 2144 ntTSL 5 BASIC13.76□□□□□ -0.21
CLDN22Q8N7P3 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
CLDN22Q8N7P3 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
CLDN22Q8N7P3 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CLDN22Q8N7P3 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC13.76□□□□□ -0.21
CLDN22Q8N7P3 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
CLDN22Q8N7P3 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CLDN22Q8N7P3 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
CLDN22Q8N7P3 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CLDN22Q8N7P3 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CLDN22Q8N7P3 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CLDN22Q8N7P3 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CLDN22Q8N7P3 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
CLDN22Q8N7P3 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CLDN22Q8N7P3 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CLDN22Q8N7P3 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CLDN22Q8N7P3 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CLDN22Q8N7P3 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC13.75□□□□□ -0.21
CLDN22Q8N7P3 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC13.75□□□□□ -0.21
CLDN22Q8N7P3 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CLDN22Q8N7P3 TCAF1P1-201ENST00000414990 2232 ntBASIC13.75□□□□□ -0.21
CLDN22Q8N7P3 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
CLDN22Q8N7P3 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC13.75□□□□□ -0.21
CLDN22Q8N7P3 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
CLDN22Q8N7P3 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CLDN22Q8N7P3 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CLDN22Q8N7P3 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
CLDN22Q8N7P3 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
CLDN22Q8N7P3 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC13.75□□□□□ -0.21
CLDN22Q8N7P3 AC093525.8-201ENST00000624099 1342 ntBASIC13.75□□□□□ -0.21
CLDN22Q8N7P3 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
CLDN22Q8N7P3 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
CLDN22Q8N7P3 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC13.75□□□□□ -0.21
CLDN22Q8N7P3 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC13.75□□□□□ -0.21
CLDN22Q8N7P3 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC13.75□□□□□ -0.21
CLDN22Q8N7P3 AC004890.2-204ENST00000481968 304 ntBASIC13.75□□□□□ -0.21
CLDN22Q8N7P3 AC022447.6-201ENST00000515522 438 ntBASIC13.75□□□□□ -0.21
CLDN22Q8N7P3 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC13.75□□□□□ -0.21
CLDN22Q8N7P3 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC13.75□□□□□ -0.21
CLDN22Q8N7P3 STOM-203ENST00000538954 1257 ntTSL 5 BASIC13.75□□□□□ -0.21
CLDN22Q8N7P3 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC13.75□□□□□ -0.21
CLDN22Q8N7P3 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
CLDN22Q8N7P3 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC13.75□□□□□ -0.21
CLDN22Q8N7P3 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC13.75□□□□□ -0.21
CLDN22Q8N7P3 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CLDN22Q8N7P3 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
CLDN22Q8N7P3 AL158212.4-201ENST00000624062 1286 ntBASIC13.75□□□□□ -0.21
CLDN22Q8N7P3 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC13.75□□□□□ -0.21
CLDN22Q8N7P3 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
CLDN22Q8N7P3 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CLDN22Q8N7P3 ST20-AS1-201ENST00000560255 4223 ntBASIC13.75□□□□□ -0.21
CLDN22Q8N7P3 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC13.75□□□□□ -0.21
CLDN22Q8N7P3 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
CLDN22Q8N7P3 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CLDN22Q8N7P3 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CLDN22Q8N7P3 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CLDN22Q8N7P3 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
CLDN22Q8N7P3 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
CLDN22Q8N7P3 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
CLDN22Q8N7P3 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CLDN22Q8N7P3 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
CLDN22Q8N7P3 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CLDN22Q8N7P3 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CLDN22Q8N7P3 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CLDN22Q8N7P3 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CLDN22Q8N7P3 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CLDN22Q8N7P3 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CLDN22Q8N7P3 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
CLDN22Q8N7P3 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
CLDN22Q8N7P3 AL354702.1-201ENST00000442006 1960 ntBASIC13.74□□□□□ -0.21
CLDN22Q8N7P3 CLK3P2-201ENST00000427566 1453 ntBASIC13.74□□□□□ -0.21
CLDN22Q8N7P3 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms