Protein–RNA interactions for Protein: Q8N4S0

CCDC82, Coiled-coil domain-containing protein 82, humanhuman

Predictions only

Length 544 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC82Q8N4S0 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC82Q8N4S0 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC82Q8N4S0 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC82Q8N4S0 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC17.57■□□□□ 0.4
CCDC82Q8N4S0 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC82Q8N4S0 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC82Q8N4S0 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC82Q8N4S0 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC17.57■□□□□ 0.4
CCDC82Q8N4S0 HIST1H2BPS3-201ENST00000419683 341 ntBASIC17.57■□□□□ 0.4
CCDC82Q8N4S0 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC17.57■□□□□ 0.4
CCDC82Q8N4S0 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC17.57■□□□□ 0.4
CCDC82Q8N4S0 AC007551.1-201ENST00000457394 519 ntBASIC17.57■□□□□ 0.4
CCDC82Q8N4S0 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC17.57■□□□□ 0.4
CCDC82Q8N4S0 HILS1-202ENST00000545329 423 ntBASIC17.57■□□□□ 0.4
CCDC82Q8N4S0 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC17.57■□□□□ 0.4
CCDC82Q8N4S0 AL512343.1-201ENST00000605837 169 ntBASIC17.57■□□□□ 0.4
CCDC82Q8N4S0 WNT11-204ENST00000621122 789 ntTSL 5 BASIC17.57■□□□□ 0.4
CCDC82Q8N4S0 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC17.57■□□□□ 0.4
CCDC82Q8N4S0 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC82Q8N4S0 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC82Q8N4S0 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
CCDC82Q8N4S0 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
CCDC82Q8N4S0 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC17.57■□□□□ 0.4
CCDC82Q8N4S0 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC82Q8N4S0 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC82Q8N4S0 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC17.57■□□□□ 0.4
CCDC82Q8N4S0 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC82Q8N4S0 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC17.57■□□□□ 0.4
CCDC82Q8N4S0 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
CCDC82Q8N4S0 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC82Q8N4S0 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC17.56■□□□□ 0.4
CCDC82Q8N4S0 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC82Q8N4S0 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC17.56■□□□□ 0.4
CCDC82Q8N4S0 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC82Q8N4S0 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC82Q8N4S0 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC82Q8N4S0 AC079776.1-201ENST00000401540 1152 ntBASIC17.56■□□□□ 0.4
CCDC82Q8N4S0 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC17.56■□□□□ 0.4
CCDC82Q8N4S0 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC17.56■□□□□ 0.4
CCDC82Q8N4S0 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC17.56■□□□□ 0.4
CCDC82Q8N4S0 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC17.56■□□□□ 0.4
CCDC82Q8N4S0 AL590640.2-201ENST00000457038 527 ntBASIC17.56■□□□□ 0.4
CCDC82Q8N4S0 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
CCDC82Q8N4S0 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC17.56■□□□□ 0.4
CCDC82Q8N4S0 RAB43P1-201ENST00000561790 589 ntBASIC17.56■□□□□ 0.4
CCDC82Q8N4S0 AC025279.2-201ENST00000569730 653 ntBASIC17.56■□□□□ 0.4
CCDC82Q8N4S0 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC17.56■□□□□ 0.4
CCDC82Q8N4S0 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC17.56■□□□□ 0.4
CCDC82Q8N4S0 AL162274.1-201ENST00000617191 1098 ntBASIC17.56■□□□□ 0.4
CCDC82Q8N4S0 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
CCDC82Q8N4S0 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
CCDC82Q8N4S0 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC82Q8N4S0 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC82Q8N4S0 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC17.56■□□□□ 0.4
CCDC82Q8N4S0 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC82Q8N4S0 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC82Q8N4S0 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC82Q8N4S0 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC82Q8N4S0 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
CCDC82Q8N4S0 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC82Q8N4S0 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC17.56■□□□□ 0.4
CCDC82Q8N4S0 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
CCDC82Q8N4S0 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC82Q8N4S0 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC82Q8N4S0 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC82Q8N4S0 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
CCDC82Q8N4S0 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
CCDC82Q8N4S0 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
CCDC82Q8N4S0 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC17.55■□□□□ 0.4
CCDC82Q8N4S0 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC82Q8N4S0 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC82Q8N4S0 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC82Q8N4S0 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC82Q8N4S0 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC82Q8N4S0 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC82Q8N4S0 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC82Q8N4S0 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC82Q8N4S0 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC82Q8N4S0 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
CCDC82Q8N4S0 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC82Q8N4S0 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC17.55■□□□□ 0.4
CCDC82Q8N4S0 AC016694.1-201ENST00000434179 700 ntBASIC17.55■□□□□ 0.4
CCDC82Q8N4S0 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC82Q8N4S0 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
CCDC82Q8N4S0 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC82Q8N4S0 ORC6-206ENST00000568364 888 ntTSL 5 BASIC17.55■□□□□ 0.4
CCDC82Q8N4S0 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC17.55■□□□□ 0.4
CCDC82Q8N4S0 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC82Q8N4S0 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
CCDC82Q8N4S0 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC82Q8N4S0 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC17.55■□□□□ 0.4
CCDC82Q8N4S0 ETV2-208ENST00000621247 941 ntTSL 5 BASIC17.55■□□□□ 0.4
CCDC82Q8N4S0 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC17.55■□□□□ 0.4
CCDC82Q8N4S0 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC82Q8N4S0 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC17.55■□□□□ 0.4
CCDC82Q8N4S0 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC17.55■□□□□ 0.4
CCDC82Q8N4S0 PDIA3P1-201ENST00000471856 1510 ntBASIC17.55■□□□□ 0.4
CCDC82Q8N4S0 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC82Q8N4S0 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC17.55■□□□□ 0.4
CCDC82Q8N4S0 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms