Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SYNPOQ8N3V7 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SYNPOQ8N3V7 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SYNPOQ8N3V7 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC15.23■□□□□ 0.03
SYNPOQ8N3V7 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
SYNPOQ8N3V7 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SYNPOQ8N3V7 BNIP1-201ENST00000231668 1339 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SYNPOQ8N3V7 AC104667.2-202ENST00000452801 1301 ntTSL 2 BASIC15.23■□□□□ 0.03
SYNPOQ8N3V7 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SYNPOQ8N3V7 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SYNPOQ8N3V7 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SYNPOQ8N3V7 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SYNPOQ8N3V7 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SYNPOQ8N3V7 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SYNPOQ8N3V7 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SYNPOQ8N3V7 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SYNPOQ8N3V7 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SYNPOQ8N3V7 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SYNPOQ8N3V7 UFM1-202ENST00000379649 846 ntTSL 4 BASIC15.23■□□□□ 0.03
SYNPOQ8N3V7 FAM3B-203ENST00000398647 864 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
SYNPOQ8N3V7 FAM3B-204ENST00000398652 1125 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SYNPOQ8N3V7 RPL17P11-201ENST00000417593 544 ntBASIC15.23■□□□□ 0.03
SYNPOQ8N3V7 AC012441.2-201ENST00000444843 739 ntBASIC15.23■□□□□ 0.03
SYNPOQ8N3V7 PPP2R1A-209ENST00000477989 444 ntTSL 3 BASIC15.23■□□□□ 0.03
SYNPOQ8N3V7 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SYNPOQ8N3V7 AC008438.1-201ENST00000507521 549 ntTSL 2 BASIC15.23■□□□□ 0.03
SYNPOQ8N3V7 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC15.23■□□□□ 0.03
SYNPOQ8N3V7 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
SYNPOQ8N3V7 MIR5572-201ENST00000583188 137 ntBASIC15.23■□□□□ 0.03
SYNPOQ8N3V7 AC020922.3-201ENST00000595064 547 ntBASIC15.23■□□□□ 0.03
SYNPOQ8N3V7 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC15.23■□□□□ 0.03
SYNPOQ8N3V7 AC006453.1-201ENST00000636037 1257 ntBASIC15.23■□□□□ 0.03
SYNPOQ8N3V7 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SYNPOQ8N3V7 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SYNPOQ8N3V7 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SYNPOQ8N3V7 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SYNPOQ8N3V7 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC15.23■□□□□ 0.03
SYNPOQ8N3V7 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC15.23■□□□□ 0.03
SYNPOQ8N3V7 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
SYNPOQ8N3V7 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC15.23■□□□□ 0.03
SYNPOQ8N3V7 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SYNPOQ8N3V7 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC15.23■□□□□ 0.03
SYNPOQ8N3V7 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SYNPOQ8N3V7 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SYNPOQ8N3V7 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC15.22■□□□□ 0.03
SYNPOQ8N3V7 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
SYNPOQ8N3V7 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SYNPOQ8N3V7 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC15.22■□□□□ 0.03
SYNPOQ8N3V7 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC15.22■□□□□ 0.03
SYNPOQ8N3V7 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SYNPOQ8N3V7 AC092978.1-201ENST00000474979 1309 ntTSL 5 BASIC15.22■□□□□ 0.03
SYNPOQ8N3V7 AC092978.1-202ENST00000637590 1327 ntBASIC15.22■□□□□ 0.03
SYNPOQ8N3V7 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
SYNPOQ8N3V7 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SYNPOQ8N3V7 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC15.22■□□□□ 0.03
SYNPOQ8N3V7 AL365209.1-201ENST00000624418 6473 ntBASIC15.22■□□□□ 0.03
SYNPOQ8N3V7 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
SYNPOQ8N3V7 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
SYNPOQ8N3V7 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC15.22■□□□□ 0.03
SYNPOQ8N3V7 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SYNPOQ8N3V7 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
SYNPOQ8N3V7 COL5A1-AS1-201ENST00000371813 336 ntTSL 2 BASIC15.22■□□□□ 0.03
SYNPOQ8N3V7 DYDC1-201ENST00000372202 612 ntAPPRIS P1 TSL 3 BASIC15.22■□□□□ 0.03
SYNPOQ8N3V7 STX1A-202ENST00000395154 1022 ntTSL 3 BASIC15.22■□□□□ 0.03
SYNPOQ8N3V7 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC15.22■□□□□ 0.03
SYNPOQ8N3V7 AC060234.1-201ENST00000422966 474 ntTSL 3 BASIC15.22■□□□□ 0.03
SYNPOQ8N3V7 GDAP1-202ENST00000434412 1228 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SYNPOQ8N3V7 LINC01806-201ENST00000436506 765 ntTSL 2 BASIC15.22■□□□□ 0.03
SYNPOQ8N3V7 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC15.22■□□□□ 0.03
SYNPOQ8N3V7 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC15.22■□□□□ 0.03
SYNPOQ8N3V7 MBP-227ENST00000526111 581 ntTSL 4 BASIC15.22■□□□□ 0.03
SYNPOQ8N3V7 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
SYNPOQ8N3V7 AC090857.1-201ENST00000527400 390 ntBASIC15.22■□□□□ 0.03
SYNPOQ8N3V7 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC15.22■□□□□ 0.03
SYNPOQ8N3V7 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC15.22■□□□□ 0.03
SYNPOQ8N3V7 AC138696.2-201ENST00000607376 223 ntBASIC15.22■□□□□ 0.03
SYNPOQ8N3V7 AF254983.2-201ENST00000612331 135 ntBASIC15.22■□□□□ 0.03
SYNPOQ8N3V7 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SYNPOQ8N3V7 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SYNPOQ8N3V7 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
SYNPOQ8N3V7 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SYNPOQ8N3V7 MPZL2-202ENST00000438295 1370 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SYNPOQ8N3V7 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
SYNPOQ8N3V7 AC006058.4-201ENST00000624016 1670 ntBASIC15.22■□□□□ 0.03
SYNPOQ8N3V7 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SYNPOQ8N3V7 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SYNPOQ8N3V7 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SYNPOQ8N3V7 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
SYNPOQ8N3V7 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC15.21■□□□□ 0.03
SYNPOQ8N3V7 AC023824.1-201ENST00000562945 2975 ntBASIC15.21■□□□□ 0.03
SYNPOQ8N3V7 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
SYNPOQ8N3V7 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
SYNPOQ8N3V7 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC15.21■□□□□ 0.03
SYNPOQ8N3V7 REXO1L5P-201ENST00000622260 2098 ntBASIC15.21■□□□□ 0.03
SYNPOQ8N3V7 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
SYNPOQ8N3V7 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
SYNPOQ8N3V7 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
SYNPOQ8N3V7 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
SYNPOQ8N3V7 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC15.21■□□□□ 0.03
SYNPOQ8N3V7 AC136621.1-201ENST00000624017 2304 ntBASIC15.21■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms