Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC13.84□□□□□ -0.19
C9orf40Q8IXQ3 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC13.84□□□□□ -0.19
C9orf40Q8IXQ3 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC13.84□□□□□ -0.19
C9orf40Q8IXQ3 CICP14-201ENST00000629111 2732 ntBASIC13.84□□□□□ -0.19
C9orf40Q8IXQ3 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
C9orf40Q8IXQ3 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
C9orf40Q8IXQ3 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC13.84□□□□□ -0.19
C9orf40Q8IXQ3 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
C9orf40Q8IXQ3 AL136309.1-201ENST00000403917 691 ntBASIC13.84□□□□□ -0.19
C9orf40Q8IXQ3 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC13.84□□□□□ -0.19
C9orf40Q8IXQ3 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC13.84□□□□□ -0.19
C9orf40Q8IXQ3 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC13.84□□□□□ -0.19
C9orf40Q8IXQ3 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC13.84□□□□□ -0.19
C9orf40Q8IXQ3 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC13.84□□□□□ -0.19
C9orf40Q8IXQ3 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC13.84□□□□□ -0.19
C9orf40Q8IXQ3 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC13.84□□□□□ -0.19
C9orf40Q8IXQ3 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC13.84□□□□□ -0.19
C9orf40Q8IXQ3 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC13.84□□□□□ -0.19
C9orf40Q8IXQ3 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
C9orf40Q8IXQ3 TECR-220ENST00000600083 1204 ntTSL 2 BASIC13.84□□□□□ -0.19
C9orf40Q8IXQ3 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC13.84□□□□□ -0.19
C9orf40Q8IXQ3 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC13.84□□□□□ -0.19
C9orf40Q8IXQ3 ZACNP1-201ENST00000612259 710 ntBASIC13.84□□□□□ -0.19
C9orf40Q8IXQ3 AL033527.4-201ENST00000641026 673 ntBASIC13.84□□□□□ -0.19
C9orf40Q8IXQ3 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
C9orf40Q8IXQ3 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
C9orf40Q8IXQ3 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC13.84□□□□□ -0.19
C9orf40Q8IXQ3 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
C9orf40Q8IXQ3 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC13.84□□□□□ -0.19
C9orf40Q8IXQ3 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
C9orf40Q8IXQ3 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
C9orf40Q8IXQ3 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
C9orf40Q8IXQ3 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC13.84□□□□□ -0.19
C9orf40Q8IXQ3 AC067930.6-201ENST00000623257 4947 ntBASIC13.84□□□□□ -0.19
C9orf40Q8IXQ3 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
C9orf40Q8IXQ3 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
C9orf40Q8IXQ3 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC13.84□□□□□ -0.19
C9orf40Q8IXQ3 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
C9orf40Q8IXQ3 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC13.84□□□□□ -0.19
C9orf40Q8IXQ3 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC13.84□□□□□ -0.19
C9orf40Q8IXQ3 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
C9orf40Q8IXQ3 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.19
C9orf40Q8IXQ3 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.19
C9orf40Q8IXQ3 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.19
C9orf40Q8IXQ3 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
C9orf40Q8IXQ3 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC13.83□□□□□ -0.19
C9orf40Q8IXQ3 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
C9orf40Q8IXQ3 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
C9orf40Q8IXQ3 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC13.83□□□□□ -0.19
C9orf40Q8IXQ3 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC13.83□□□□□ -0.19
C9orf40Q8IXQ3 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
C9orf40Q8IXQ3 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
C9orf40Q8IXQ3 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
C9orf40Q8IXQ3 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
C9orf40Q8IXQ3 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
C9orf40Q8IXQ3 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
C9orf40Q8IXQ3 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
C9orf40Q8IXQ3 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
C9orf40Q8IXQ3 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
C9orf40Q8IXQ3 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC13.83□□□□□ -0.2
C9orf40Q8IXQ3 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
C9orf40Q8IXQ3 AC131206.1-201ENST00000538078 1211 ntBASIC13.83□□□□□ -0.2
C9orf40Q8IXQ3 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC13.83□□□□□ -0.2
C9orf40Q8IXQ3 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
C9orf40Q8IXQ3 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC13.83□□□□□ -0.2
C9orf40Q8IXQ3 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
C9orf40Q8IXQ3 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
C9orf40Q8IXQ3 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
C9orf40Q8IXQ3 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
C9orf40Q8IXQ3 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC13.83□□□□□ -0.2
C9orf40Q8IXQ3 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
C9orf40Q8IXQ3 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC13.83□□□□□ -0.2
C9orf40Q8IXQ3 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
C9orf40Q8IXQ3 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
C9orf40Q8IXQ3 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
C9orf40Q8IXQ3 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC13.83□□□□□ -0.2
C9orf40Q8IXQ3 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
C9orf40Q8IXQ3 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
C9orf40Q8IXQ3 CICP24-201ENST00000605464 2705 ntBASIC13.83□□□□□ -0.2
C9orf40Q8IXQ3 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
C9orf40Q8IXQ3 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC13.83□□□□□ -0.2
C9orf40Q8IXQ3 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
C9orf40Q8IXQ3 C1R-202ENST00000536053 2347 ntTSL 2 BASIC13.82□□□□□ -0.2
C9orf40Q8IXQ3 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC13.82□□□□□ -0.2
C9orf40Q8IXQ3 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
C9orf40Q8IXQ3 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
C9orf40Q8IXQ3 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
C9orf40Q8IXQ3 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC13.82□□□□□ -0.2
C9orf40Q8IXQ3 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
C9orf40Q8IXQ3 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
C9orf40Q8IXQ3 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
C9orf40Q8IXQ3 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
C9orf40Q8IXQ3 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
C9orf40Q8IXQ3 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC13.82□□□□□ -0.2
C9orf40Q8IXQ3 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
C9orf40Q8IXQ3 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
C9orf40Q8IXQ3 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
C9orf40Q8IXQ3 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
C9orf40Q8IXQ3 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
C9orf40Q8IXQ3 AL023775.1-201ENST00000454907 1746 ntBASIC13.82□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms