Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC15.02□□□□□ -0.01
NUDCD3Q8IVD9 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
NUDCD3Q8IVD9 MYLK-203ENST00000359169 7585 ntAPPRIS P3 TSL 5 BASIC15.02□□□□□ -0.01
NUDCD3Q8IVD9 MVK-214ENST00000629016 1591 ntTSL 5 BASIC15.02□□□□□ -0.01
NUDCD3Q8IVD9 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC15.02□□□□□ -0.01
NUDCD3Q8IVD9 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC15.02□□□□□ -0.01
NUDCD3Q8IVD9 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
NUDCD3Q8IVD9 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
NUDCD3Q8IVD9 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
NUDCD3Q8IVD9 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC15.01□□□□□ -0.01
NUDCD3Q8IVD9 AC005252.3-201ENST00000623855 2258 ntBASIC15.01□□□□□ -0.01
NUDCD3Q8IVD9 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC15.01□□□□□ -0.01
NUDCD3Q8IVD9 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC15.01□□□□□ -0.01
NUDCD3Q8IVD9 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
NUDCD3Q8IVD9 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
NUDCD3Q8IVD9 CETN4P-206ENST00000642099 2168 ntBASIC15.01□□□□□ -0.01
NUDCD3Q8IVD9 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
NUDCD3Q8IVD9 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
NUDCD3Q8IVD9 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
NUDCD3Q8IVD9 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC15.01□□□□□ -0.01
NUDCD3Q8IVD9 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
NUDCD3Q8IVD9 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC15.01□□□□□ -0.01
NUDCD3Q8IVD9 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC15.01□□□□□ -0.01
NUDCD3Q8IVD9 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
NUDCD3Q8IVD9 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
NUDCD3Q8IVD9 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
NUDCD3Q8IVD9 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
NUDCD3Q8IVD9 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
NUDCD3Q8IVD9 PMP22-202ENST00000395936 816 ntTSL 3 BASIC15.01□□□□□ -0.01
NUDCD3Q8IVD9 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
NUDCD3Q8IVD9 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC15.01□□□□□ -0.01
NUDCD3Q8IVD9 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC15.01□□□□□ -0.01
NUDCD3Q8IVD9 GPS2P2-201ENST00000430745 888 ntBASIC15.01□□□□□ -0.01
NUDCD3Q8IVD9 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC15.01□□□□□ -0.01
NUDCD3Q8IVD9 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC15.01□□□□□ -0.01
NUDCD3Q8IVD9 ALG1L5P-201ENST00000482043 771 ntBASIC15.01□□□□□ -0.01
NUDCD3Q8IVD9 PUS1-205ENST00000535067 838 ntTSL 3 BASIC15.01□□□□□ -0.01
NUDCD3Q8IVD9 AC093520.2-201ENST00000561830 333 ntBASIC15.01□□□□□ -0.01
NUDCD3Q8IVD9 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC15.01□□□□□ -0.01
NUDCD3Q8IVD9 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC15.01□□□□□ -0.01
NUDCD3Q8IVD9 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC15.01□□□□□ -0.01
NUDCD3Q8IVD9 AL157414.3-201ENST00000624276 1954 ntBASIC15.01□□□□□ -0.01
NUDCD3Q8IVD9 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC15.01□□□□□ -0.01
NUDCD3Q8IVD9 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
NUDCD3Q8IVD9 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
NUDCD3Q8IVD9 AL137784.3-201ENST00000623858 2288 ntBASIC15.01□□□□□ -0.01
NUDCD3Q8IVD9 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
NUDCD3Q8IVD9 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
NUDCD3Q8IVD9 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
NUDCD3Q8IVD9 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC15.01□□□□□ -0.01
NUDCD3Q8IVD9 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC15.01□□□□□ -0.01
NUDCD3Q8IVD9 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
NUDCD3Q8IVD9 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
NUDCD3Q8IVD9 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
NUDCD3Q8IVD9 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
NUDCD3Q8IVD9 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
NUDCD3Q8IVD9 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
NUDCD3Q8IVD9 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
NUDCD3Q8IVD9 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
NUDCD3Q8IVD9 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
NUDCD3Q8IVD9 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC15□□□□□ -0.01
NUDCD3Q8IVD9 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
NUDCD3Q8IVD9 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC15□□□□□ -0.01
NUDCD3Q8IVD9 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC15□□□□□ -0.01
NUDCD3Q8IVD9 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC15□□□□□ -0.01
NUDCD3Q8IVD9 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
NUDCD3Q8IVD9 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
NUDCD3Q8IVD9 TEX30-205ENST00000376029 959 ntTSL 2 BASIC15□□□□□ -0.01
NUDCD3Q8IVD9 AL080243.2-201ENST00000418783 582 ntBASIC15□□□□□ -0.01
NUDCD3Q8IVD9 RPP21-221ENST00000428040 594 ntTSL 2 BASIC15□□□□□ -0.01
NUDCD3Q8IVD9 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
NUDCD3Q8IVD9 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC15□□□□□ -0.01
NUDCD3Q8IVD9 AC004066.1-201ENST00000502488 802 ntBASIC15□□□□□ -0.01
NUDCD3Q8IVD9 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC15□□□□□ -0.01
NUDCD3Q8IVD9 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC15□□□□□ -0.01
NUDCD3Q8IVD9 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC15□□□□□ -0.01
NUDCD3Q8IVD9 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
NUDCD3Q8IVD9 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC15□□□□□ -0.01
NUDCD3Q8IVD9 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC15□□□□□ -0.01
NUDCD3Q8IVD9 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC15□□□□□ -0.01
NUDCD3Q8IVD9 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC15□□□□□ -0.01
NUDCD3Q8IVD9 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC15□□□□□ -0.01
NUDCD3Q8IVD9 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC15□□□□□ -0.01
NUDCD3Q8IVD9 INO80C-210ENST00000590757 595 ntTSL 2 BASIC15□□□□□ -0.01
NUDCD3Q8IVD9 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC15□□□□□ -0.01
NUDCD3Q8IVD9 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC15□□□□□ -0.01
NUDCD3Q8IVD9 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC15□□□□□ -0.01
NUDCD3Q8IVD9 RAB34-224ENST00000636513 888 ntTSL 5 BASIC15□□□□□ -0.01
NUDCD3Q8IVD9 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC15□□□□□ -0.01
NUDCD3Q8IVD9 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
NUDCD3Q8IVD9 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC15□□□□□ -0.01
NUDCD3Q8IVD9 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
NUDCD3Q8IVD9 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC15□□□□□ -0.01
NUDCD3Q8IVD9 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
NUDCD3Q8IVD9 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC15□□□□□ -0.01
NUDCD3Q8IVD9 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC15□□□□□ -0.01
NUDCD3Q8IVD9 GOLGA8VP-201ENST00000559009 1798 ntBASIC15□□□□□ -0.01
NUDCD3Q8IVD9 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC15□□□□□ -0.01
NUDCD3Q8IVD9 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
NUDCD3Q8IVD9 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC15□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms