Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TRIM50Q86XT4 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC16.73■□□□□ 0.27
TRIM50Q86XT4 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRIM50Q86XT4 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
TRIM50Q86XT4 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC16.73■□□□□ 0.27
TRIM50Q86XT4 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRIM50Q86XT4 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRIM50Q86XT4 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC16.73■□□□□ 0.27
TRIM50Q86XT4 SLC9A7P1-201ENST00000554295 3311 ntBASIC16.73■□□□□ 0.27
TRIM50Q86XT4 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TRIM50Q86XT4 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC16.73■□□□□ 0.27
TRIM50Q86XT4 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRIM50Q86XT4 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRIM50Q86XT4 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
TRIM50Q86XT4 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRIM50Q86XT4 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC16.72■□□□□ 0.27
TRIM50Q86XT4 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC16.72■□□□□ 0.27
TRIM50Q86XT4 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC16.72■□□□□ 0.27
TRIM50Q86XT4 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
TRIM50Q86XT4 E2F3P2-201ENST00000447755 1422 ntBASIC16.72■□□□□ 0.27
TRIM50Q86XT4 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRIM50Q86XT4 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRIM50Q86XT4 AC126365.1-201ENST00000578585 1514 ntBASIC16.72■□□□□ 0.27
TRIM50Q86XT4 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRIM50Q86XT4 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TRIM50Q86XT4 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRIM50Q86XT4 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRIM50Q86XT4 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TRIM50Q86XT4 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TRIM50Q86XT4 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRIM50Q86XT4 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TRIM50Q86XT4 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
TRIM50Q86XT4 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC16.72■□□□□ 0.27
TRIM50Q86XT4 AC021723.1-201ENST00000486306 515 ntBASIC16.72■□□□□ 0.27
TRIM50Q86XT4 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC16.72■□□□□ 0.27
TRIM50Q86XT4 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC16.72■□□□□ 0.27
TRIM50Q86XT4 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC16.72■□□□□ 0.27
TRIM50Q86XT4 AC022748.3-201ENST00000621828 275 ntBASIC16.72■□□□□ 0.27
TRIM50Q86XT4 PPA1-206ENST00000625364 644 ntTSL 5 BASIC16.72■□□□□ 0.27
TRIM50Q86XT4 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC16.72■□□□□ 0.27
TRIM50Q86XT4 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRIM50Q86XT4 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TRIM50Q86XT4 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
TRIM50Q86XT4 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRIM50Q86XT4 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TRIM50Q86XT4 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRIM50Q86XT4 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRIM50Q86XT4 PPT1-215ENST00000641471 2368 ntBASIC16.72■□□□□ 0.27
TRIM50Q86XT4 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRIM50Q86XT4 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRIM50Q86XT4 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRIM50Q86XT4 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRIM50Q86XT4 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRIM50Q86XT4 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRIM50Q86XT4 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
TRIM50Q86XT4 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRIM50Q86XT4 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRIM50Q86XT4 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
TRIM50Q86XT4 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRIM50Q86XT4 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC16.71■□□□□ 0.27
TRIM50Q86XT4 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TRIM50Q86XT4 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRIM50Q86XT4 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
TRIM50Q86XT4 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
TRIM50Q86XT4 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC16.71■□□□□ 0.27
TRIM50Q86XT4 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRIM50Q86XT4 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TRIM50Q86XT4 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC16.71■□□□□ 0.27
TRIM50Q86XT4 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
TRIM50Q86XT4 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRIM50Q86XT4 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRIM50Q86XT4 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRIM50Q86XT4 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
TRIM50Q86XT4 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TRIM50Q86XT4 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC16.71■□□□□ 0.27
TRIM50Q86XT4 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
TRIM50Q86XT4 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC16.71■□□□□ 0.27
TRIM50Q86XT4 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC16.71■□□□□ 0.27
TRIM50Q86XT4 EIF4HP1-201ENST00000453115 687 ntBASIC16.71■□□□□ 0.27
TRIM50Q86XT4 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC16.71■□□□□ 0.27
TRIM50Q86XT4 SDHD-202ENST00000525291 790 ntTSL 3 BASIC16.71■□□□□ 0.27
TRIM50Q86XT4 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC16.71■□□□□ 0.27
TRIM50Q86XT4 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
TRIM50Q86XT4 AL589935.2-201ENST00000616471 1231 ntBASIC16.71■□□□□ 0.27
TRIM50Q86XT4 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC16.71■□□□□ 0.27
TRIM50Q86XT4 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
TRIM50Q86XT4 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRIM50Q86XT4 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRIM50Q86XT4 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRIM50Q86XT4 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRIM50Q86XT4 MROH4P-201ENST00000431302 1578 ntBASIC16.71■□□□□ 0.27
TRIM50Q86XT4 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TRIM50Q86XT4 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRIM50Q86XT4 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC16.71■□□□□ 0.27
TRIM50Q86XT4 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
TRIM50Q86XT4 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC16.71■□□□□ 0.26
TRIM50Q86XT4 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
TRIM50Q86XT4 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.26
TRIM50Q86XT4 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
TRIM50Q86XT4 AL138725.1-201ENST00000407347 1314 ntBASIC16.7■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 65.6 ms