Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RSPO4Q2I0M5 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
RSPO4Q2I0M5 MIR566-201ENST00000385187 94 ntBASIC14.42□□□□□ -0.1
RSPO4Q2I0M5 PPM1N-201ENST00000396735 895 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
RSPO4Q2I0M5 OR51A9P-201ENST00000422578 911 ntBASIC14.42□□□□□ -0.1
RSPO4Q2I0M5 FAM92A-202ENST00000423990 914 ntTSL 5 BASIC14.42□□□□□ -0.1
RSPO4Q2I0M5 AC004895.1-203ENST00000428901 540 ntTSL 4 BASIC14.42□□□□□ -0.1
RSPO4Q2I0M5 Z99943.1-201ENST00000451545 718 ntTSL 3 BASIC14.42□□□□□ -0.1
RSPO4Q2I0M5 RPS6KA2-AS1-201ENST00000455390 627 ntTSL 5 BASIC14.42□□□□□ -0.1
RSPO4Q2I0M5 PPM1N-208ENST00000456399 618 ntTSL 3 BASIC14.42□□□□□ -0.1
RSPO4Q2I0M5 CISD2-202ENST00000503643 808 ntTSL 2 BASIC14.42□□□□□ -0.1
RSPO4Q2I0M5 AL121796.1-201ENST00000505702 466 ntTSL 3 BASIC14.42□□□□□ -0.1
RSPO4Q2I0M5 LINC01598-205ENST00000508763 719 ntTSL 5 BASIC14.42□□□□□ -0.1
RSPO4Q2I0M5 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC14.42□□□□□ -0.1
RSPO4Q2I0M5 PCMTD1-207ENST00000522514 1287 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
RSPO4Q2I0M5 AP005264.6-204ENST00000588436 719 ntBASIC14.42□□□□□ -0.1
RSPO4Q2I0M5 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC14.42□□□□□ -0.1
RSPO4Q2I0M5 TP53-221ENST00000615910 1149 ntTSL 5 BASIC14.42□□□□□ -0.1
RSPO4Q2I0M5 DNAJC10-211ENST00000640034 888 ntTSL 5 BASIC14.42□□□□□ -0.1
RSPO4Q2I0M5 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
RSPO4Q2I0M5 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RSPO4Q2I0M5 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
RSPO4Q2I0M5 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC14.42□□□□□ -0.1
RSPO4Q2I0M5 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RSPO4Q2I0M5 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC14.42□□□□□ -0.1
RSPO4Q2I0M5 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
RSPO4Q2I0M5 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
RSPO4Q2I0M5 SCAMP1-AS1-201ENST00000421004 1479 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
RSPO4Q2I0M5 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
RSPO4Q2I0M5 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RSPO4Q2I0M5 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RSPO4Q2I0M5 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC14.42□□□□□ -0.1
RSPO4Q2I0M5 EDNRB-204ENST00000626030 1571 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
RSPO4Q2I0M5 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC14.42□□□□□ -0.1
RSPO4Q2I0M5 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
RSPO4Q2I0M5 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
RSPO4Q2I0M5 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RSPO4Q2I0M5 AL391005.1-201ENST00000623953 2435 ntBASIC14.42□□□□□ -0.1
RSPO4Q2I0M5 INE2-201ENST00000630399 1874 ntBASIC14.42□□□□□ -0.1
RSPO4Q2I0M5 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC14.41□□□□□ -0.1
RSPO4Q2I0M5 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
RSPO4Q2I0M5 TNFRSF1A-202ENST00000366159 1339 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
RSPO4Q2I0M5 STAG1-206ENST00000480733 1304 ntTSL 2 BASIC14.41□□□□□ -0.1
RSPO4Q2I0M5 CCL18-201ENST00000616054 1324 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RSPO4Q2I0M5 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC14.41□□□□□ -0.1
RSPO4Q2I0M5 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
RSPO4Q2I0M5 KRT8P31-201ENST00000504812 1408 ntBASIC14.41□□□□□ -0.1
RSPO4Q2I0M5 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RSPO4Q2I0M5 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
RSPO4Q2I0M5 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RSPO4Q2I0M5 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
RSPO4Q2I0M5 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RSPO4Q2I0M5 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC14.41□□□□□ -0.1
RSPO4Q2I0M5 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
RSPO4Q2I0M5 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC14.41□□□□□ -0.1
RSPO4Q2I0M5 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
RSPO4Q2I0M5 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RSPO4Q2I0M5 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
RSPO4Q2I0M5 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RSPO4Q2I0M5 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RSPO4Q2I0M5 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC14.41□□□□□ -0.1
RSPO4Q2I0M5 AL157832.2-206ENST00000428178 601 ntTSL 3 BASIC14.41□□□□□ -0.1
RSPO4Q2I0M5 AC083801.1-201ENST00000491689 358 ntBASIC14.41□□□□□ -0.1
RSPO4Q2I0M5 AC026434.2-201ENST00000506094 1078 ntBASIC14.41□□□□□ -0.1
RSPO4Q2I0M5 RNA5SP417-201ENST00000516459 108 ntBASIC14.41□□□□□ -0.1
RSPO4Q2I0M5 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC14.41□□□□□ -0.1
RSPO4Q2I0M5 DUX4L47-201ENST00000566374 394 ntBASIC14.41□□□□□ -0.1
RSPO4Q2I0M5 MCEMP1-202ENST00000597445 763 ntAPPRIS ALT2 TSL 3 BASIC14.41□□□□□ -0.1
RSPO4Q2I0M5 AC008825.2-201ENST00000603374 718 ntBASIC14.41□□□□□ -0.1
RSPO4Q2I0M5 AL353622.2-201ENST00000605846 425 ntBASIC14.41□□□□□ -0.1
RSPO4Q2I0M5 MIR6720-201ENST00000611664 98 ntBASIC14.41□□□□□ -0.1
RSPO4Q2I0M5 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC14.41□□□□□ -0.1
RSPO4Q2I0M5 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
RSPO4Q2I0M5 CSAG3-203ENST00000638835 793 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
RSPO4Q2I0M5 CSAG2-204ENST00000640702 793 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
RSPO4Q2I0M5 METTL7B-202ENST00000614691 1368 ntTSL 5 BASIC14.41□□□□□ -0.1
RSPO4Q2I0M5 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RSPO4Q2I0M5 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
RSPO4Q2I0M5 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
RSPO4Q2I0M5 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RSPO4Q2I0M5 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RSPO4Q2I0M5 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RSPO4Q2I0M5 TMEM144-209ENST00000509278 1633 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
RSPO4Q2I0M5 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
RSPO4Q2I0M5 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
RSPO4Q2I0M5 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC14.4□□□□□ -0.1
RSPO4Q2I0M5 FLII-221ENST00000578558 2377 ntTSL 5 BASIC14.4□□□□□ -0.1
RSPO4Q2I0M5 GCK-209ENST00000616242 2260 ntTSL 5 BASIC14.4□□□□□ -0.1
RSPO4Q2I0M5 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC14.4□□□□□ -0.1
RSPO4Q2I0M5 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
RSPO4Q2I0M5 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC14.4□□□□□ -0.1
RSPO4Q2I0M5 CNBP-201ENST00000422453 1664 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
RSPO4Q2I0M5 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
RSPO4Q2I0M5 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
RSPO4Q2I0M5 ARRB2-218ENST00000575877 1579 ntTSL 5 BASIC14.4□□□□□ -0.1
RSPO4Q2I0M5 AP003680.1-201ENST00000598970 3660 ntBASIC14.4□□□□□ -0.1
RSPO4Q2I0M5 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
RSPO4Q2I0M5 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RSPO4Q2I0M5 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
RSPO4Q2I0M5 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms