Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC14.67□□□□□ -0.06
YBX1P67809 PTP4A1P2-201ENST00000546033 454 ntBASIC14.67□□□□□ -0.06
YBX1P67809 AC009486.1-201ENST00000569860 813 ntBASIC14.67□□□□□ -0.06
YBX1P67809 GNRHR2-203ENST00000581100 1187 ntBASIC14.67□□□□□ -0.06
YBX1P67809 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC14.67□□□□□ -0.06
YBX1P67809 AC004466.1-201ENST00000599515 1080 ntBASIC14.67□□□□□ -0.06
YBX1P67809 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC14.67□□□□□ -0.06
YBX1P67809 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
YBX1P67809 AC018665.1-201ENST00000622927 1362 ntBASIC14.67□□□□□ -0.06
YBX1P67809 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
YBX1P67809 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC14.67□□□□□ -0.06
YBX1P67809 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
YBX1P67809 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC14.67□□□□□ -0.06
YBX1P67809 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
YBX1P67809 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
YBX1P67809 AC018442.1-201ENST00000421439 2061 ntBASIC14.67□□□□□ -0.06
YBX1P67809 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC14.67□□□□□ -0.06
YBX1P67809 AC136759.1-202ENST00000530858 2194 ntBASIC14.67□□□□□ -0.06
YBX1P67809 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
YBX1P67809 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
YBX1P67809 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC14.67□□□□□ -0.06
YBX1P67809 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
YBX1P67809 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
YBX1P67809 AC063926.2-201ENST00000623766 1308 ntBASIC14.66□□□□□ -0.06
YBX1P67809 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC14.66□□□□□ -0.06
YBX1P67809 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC14.66□□□□□ -0.06
YBX1P67809 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
YBX1P67809 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
YBX1P67809 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
YBX1P67809 OS9-207ENST00000439210 1946 ntTSL 2 BASIC14.66□□□□□ -0.06
YBX1P67809 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC14.66□□□□□ -0.06
YBX1P67809 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC14.66□□□□□ -0.06
YBX1P67809 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
YBX1P67809 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC14.66□□□□□ -0.06
YBX1P67809 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
YBX1P67809 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
YBX1P67809 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
YBX1P67809 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC14.66□□□□□ -0.06
YBX1P67809 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
YBX1P67809 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC14.66□□□□□ -0.06
YBX1P67809 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
YBX1P67809 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC14.66□□□□□ -0.06
YBX1P67809 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC14.66□□□□□ -0.06
YBX1P67809 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC14.66□□□□□ -0.06
YBX1P67809 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC14.66□□□□□ -0.06
YBX1P67809 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC14.66□□□□□ -0.06
YBX1P67809 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC14.66□□□□□ -0.06
YBX1P67809 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC14.66□□□□□ -0.06
YBX1P67809 BTNL10-201ENST00000595971 695 ntBASIC14.66□□□□□ -0.06
YBX1P67809 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC14.66□□□□□ -0.06
YBX1P67809 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
YBX1P67809 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC14.66□□□□□ -0.06
YBX1P67809 AC244669.2-201ENST00000612320 853 ntBASIC14.66□□□□□ -0.06
YBX1P67809 AC145423.3-201ENST00000615987 467 ntBASIC14.66□□□□□ -0.06
YBX1P67809 WNT11-204ENST00000621122 789 ntTSL 5 BASIC14.66□□□□□ -0.06
YBX1P67809 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
YBX1P67809 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
YBX1P67809 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
YBX1P67809 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC14.66□□□□□ -0.06
YBX1P67809 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
YBX1P67809 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
YBX1P67809 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
YBX1P67809 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC14.66□□□□□ -0.06
YBX1P67809 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
YBX1P67809 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
YBX1P67809 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC14.66□□□□□ -0.06
YBX1P67809 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
YBX1P67809 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
YBX1P67809 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
YBX1P67809 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
YBX1P67809 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
YBX1P67809 KRT8P14-201ENST00000414254 1442 ntBASIC14.66□□□□□ -0.06
YBX1P67809 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC14.66□□□□□ -0.06
YBX1P67809 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
YBX1P67809 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
YBX1P67809 KRT8P35-201ENST00000483942 1338 ntBASIC14.66□□□□□ -0.06
YBX1P67809 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
YBX1P67809 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
YBX1P67809 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
YBX1P67809 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC14.65□□□□□ -0.06
YBX1P67809 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
YBX1P67809 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
YBX1P67809 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
YBX1P67809 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
YBX1P67809 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
YBX1P67809 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC14.65□□□□□ -0.06
YBX1P67809 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
YBX1P67809 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC14.65□□□□□ -0.06
YBX1P67809 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
YBX1P67809 LILRP1-201ENST00000444199 1370 ntBASIC14.65□□□□□ -0.06
YBX1P67809 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC14.65□□□□□ -0.06
YBX1P67809 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
YBX1P67809 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
YBX1P67809 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC14.65□□□□□ -0.06
YBX1P67809 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC14.65□□□□□ -0.06
YBX1P67809 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC14.65□□□□□ -0.06
YBX1P67809 AC092933.1-201ENST00000393644 945 ntBASIC14.65□□□□□ -0.06
YBX1P67809 AC079776.1-201ENST00000401540 1152 ntBASIC14.65□□□□□ -0.06
YBX1P67809 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC14.65□□□□□ -0.06
YBX1P67809 AC112492.5-201ENST00000421897 457 ntBASIC14.65□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms