Protein–RNA interactions for Protein: P60608

ERVFC1-1, Endogenous retrovirus group FC1 member 1 Env polyprotein, humanhuman

Predictions only

Length 527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERVFC1-1P60608 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC11.8□□□□□ -0.52
ERVFC1-1P60608 NFATC2-201ENST00000371564 7525 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
ERVFC1-1P60608 ZNF641-201ENST00000301042 4544 ntTSL 5 BASIC11.8□□□□□ -0.52
ERVFC1-1P60608 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC11.8□□□□□ -0.52
ERVFC1-1P60608 IL9RP2-201ENST00000423948 1312 ntBASIC11.8□□□□□ -0.52
ERVFC1-1P60608 UBE3A-209ENST00000625778 3217 ntTSL 5 BASIC11.8□□□□□ -0.52
ERVFC1-1P60608 YWHAEP7-202ENST00000620903 2455 ntTSL 2 BASIC11.8□□□□□ -0.52
ERVFC1-1P60608 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
ERVFC1-1P60608 SH3PXD2A-203ENST00000369774 11468 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
ERVFC1-1P60608 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
ERVFC1-1P60608 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
ERVFC1-1P60608 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
ERVFC1-1P60608 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
ERVFC1-1P60608 OSBPL5-201ENST00000263650 3889 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
ERVFC1-1P60608 KIRREL2-203ENST00000360202 2942 ntAPPRIS P4 TSL 1 (best) BASIC11.8□□□□□ -0.52
ERVFC1-1P60608 TRPM4-201ENST00000252826 4109 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
ERVFC1-1P60608 COL1A2-213ENST00000620463 4523 ntTSL 5 BASIC11.79□□□□□ -0.52
ERVFC1-1P60608 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
ERVFC1-1P60608 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
ERVFC1-1P60608 OTUD4-201ENST00000447906 3829 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
ERVFC1-1P60608 GRIN1-207ENST00000371560 3640 ntAPPRIS ALT1 TSL 1 (best) BASIC11.79□□□□□ -0.52
ERVFC1-1P60608 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC11.79□□□□□ -0.52
ERVFC1-1P60608 GTF2IRD1P1-202ENST00000457166 2426 ntTSL 2 BASIC11.79□□□□□ -0.52
ERVFC1-1P60608 MAP2K3-203ENST00000361818 2034 ntTSL 5 BASIC11.79□□□□□ -0.52
ERVFC1-1P60608 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC11.79□□□□□ -0.52
ERVFC1-1P60608 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC11.79□□□□□ -0.52
ERVFC1-1P60608 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
ERVFC1-1P60608 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC11.79□□□□□ -0.52
ERVFC1-1P60608 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
ERVFC1-1P60608 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC11.79□□□□□ -0.52
ERVFC1-1P60608 ZFP36L2-201ENST00000282388 3696 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
ERVFC1-1P60608 SUCO-202ENST00000367723 5916 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
ERVFC1-1P60608 AC134312.1-201ENST00000378417 3468 ntTSL 2 BASIC11.79□□□□□ -0.52
ERVFC1-1P60608 SLC26A6-213ENST00000455886 2460 ntTSL 2 BASIC11.79□□□□□ -0.52
ERVFC1-1P60608 EMILIN1-201ENST00000380320 3943 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
ERVFC1-1P60608 FAM120B-205ENST00000630384 3721 ntAPPRIS ALT2 TSL 2 BASIC11.79□□□□□ -0.52
ERVFC1-1P60608 AC018442.1-201ENST00000421439 2061 ntBASIC11.79□□□□□ -0.52
ERVFC1-1P60608 SLC9B2-202ENST00000394785 3126 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
ERVFC1-1P60608 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC11.79□□□□□ -0.52
ERVFC1-1P60608 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
ERVFC1-1P60608 BRSK2-202ENST00000382179 3576 ntTSL 2 BASIC11.79□□□□□ -0.52
ERVFC1-1P60608 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
ERVFC1-1P60608 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
ERVFC1-1P60608 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC11.79□□□□□ -0.52
ERVFC1-1P60608 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
ERVFC1-1P60608 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC11.79□□□□□ -0.52
ERVFC1-1P60608 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC11.79□□□□□ -0.52
ERVFC1-1P60608 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
ERVFC1-1P60608 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC11.79□□□□□ -0.52
ERVFC1-1P60608 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
ERVFC1-1P60608 RNPS1P1-201ENST00000507437 918 ntBASIC11.79□□□□□ -0.52
ERVFC1-1P60608 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC11.79□□□□□ -0.52
ERVFC1-1P60608 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC11.79□□□□□ -0.52
ERVFC1-1P60608 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC11.79□□□□□ -0.52
ERVFC1-1P60608 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC11.79□□□□□ -0.52
ERVFC1-1P60608 PAM16-215ENST00000577031 548 ntTSL 4 BASIC11.79□□□□□ -0.52
ERVFC1-1P60608 CYB561-216ENST00000582297 897 ntTSL 3 BASIC11.79□□□□□ -0.52
ERVFC1-1P60608 AC023511.2-201ENST00000618803 211 ntBASIC11.79□□□□□ -0.52
ERVFC1-1P60608 CAND2-206ENST00000626378 333 ntTSL 5 BASIC11.79□□□□□ -0.52
ERVFC1-1P60608 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
ERVFC1-1P60608 RSBN1L-201ENST00000334955 6422 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
ERVFC1-1P60608 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
ERVFC1-1P60608 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC11.79□□□□□ -0.52
ERVFC1-1P60608 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
ERVFC1-1P60608 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC11.79□□□□□ -0.52
ERVFC1-1P60608 CNTLN-201ENST00000380641 4871 ntAPPRIS ALT2 TSL 2 BASIC11.79□□□□□ -0.52
ERVFC1-1P60608 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC11.79□□□□□ -0.52
ERVFC1-1P60608 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
ERVFC1-1P60608 CHMP7-201ENST00000313219 3367 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
ERVFC1-1P60608 ISY1-203ENST00000393295 3842 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
ERVFC1-1P60608 MAGED4B-211ENST00000497164 2482 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
ERVFC1-1P60608 NIN-206ENST00000453196 6785 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
ERVFC1-1P60608 SLC46A1-207ENST00000612814 6376 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
ERVFC1-1P60608 STX16-NPEPL1-202ENST00000530122 3433 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
ERVFC1-1P60608 ALPP-201ENST00000392027 2971 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
ERVFC1-1P60608 ZNF259P1-201ENST00000407656 1365 ntBASIC11.79□□□□□ -0.52
ERVFC1-1P60608 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
ERVFC1-1P60608 MYO9B-204ENST00000594824 7595 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
ERVFC1-1P60608 PEAR1-201ENST00000292357 4866 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
ERVFC1-1P60608 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
ERVFC1-1P60608 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
ERVFC1-1P60608 NLRP7-209ENST00000592784 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
ERVFC1-1P60608 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
ERVFC1-1P60608 POM121L4P-202ENST00000427789 1891 ntBASIC11.78□□□□□ -0.52
ERVFC1-1P60608 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
ERVFC1-1P60608 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC11.78□□□□□ -0.52
ERVFC1-1P60608 DGCR8-201ENST00000351989 4514 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
ERVFC1-1P60608 AC012349.1-201ENST00000518662 2643 ntTSL 2 BASIC11.78□□□□□ -0.52
ERVFC1-1P60608 TYK2-205ENST00000525621 4347 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
ERVFC1-1P60608 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
ERVFC1-1P60608 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
ERVFC1-1P60608 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
ERVFC1-1P60608 FRMD4B-201ENST00000398540 5060 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
ERVFC1-1P60608 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC11.78□□□□□ -0.52
ERVFC1-1P60608 USP4-203ENST00000415188 1454 ntTSL 3 BASIC11.78□□□□□ -0.52
ERVFC1-1P60608 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
ERVFC1-1P60608 RBL1-202ENST00000373664 5684 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
ERVFC1-1P60608 KCNH6-204ENST00000581784 3017 ntTSL 2 BASIC11.78□□□□□ -0.52
ERVFC1-1P60608 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
ERVFC1-1P60608 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 52.6 ms