Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC12.98□□□□□ -0.33
AP3S2P59780 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC12.98□□□□□ -0.33
AP3S2P59780 PHLDB1-201ENST00000356063 5240 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
AP3S2P59780 UQCRB-201ENST00000287022 5575 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
AP3S2P59780 HGNC:18790-201ENST00000397958 2650 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
AP3S2P59780 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
AP3S2P59780 RAB6B-201ENST00000285208 5526 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
AP3S2P59780 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
AP3S2P59780 MORC4-202ENST00000355610 3834 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
AP3S2P59780 SOGA3-207ENST00000481848 11464 ntAPPRIS P5 TSL 5 BASIC12.97□□□□□ -0.33
AP3S2P59780 LPCAT2-201ENST00000262134 5391 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
AP3S2P59780 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
AP3S2P59780 SAMD15-201ENST00000216471 2564 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
AP3S2P59780 NUP133-201ENST00000261396 5207 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
AP3S2P59780 GTF2I-215ENST00000614986 4415 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
AP3S2P59780 GTF2I-221ENST00000621734 4412 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
AP3S2P59780 MED12L-202ENST00000309237 2862 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
AP3S2P59780 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
AP3S2P59780 CETP-203ENST00000566128 1733 ntTSL 5 BASIC12.97□□□□□ -0.33
AP3S2P59780 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
AP3S2P59780 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC12.97□□□□□ -0.33
AP3S2P59780 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
AP3S2P59780 RHOQP3-201ENST00000437982 621 ntBASIC12.97□□□□□ -0.33
AP3S2P59780 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC12.97□□□□□ -0.33
AP3S2P59780 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
AP3S2P59780 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC12.97□□□□□ -0.33
AP3S2P59780 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC12.97□□□□□ -0.33
AP3S2P59780 MED16-214ENST00000617672 554 ntTSL 5 BASIC12.97□□□□□ -0.33
AP3S2P59780 FAM193A-201ENST00000324666 4846 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
AP3S2P59780 RNF43-201ENST00000407977 5516 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
AP3S2P59780 PSME3-203ENST00000541124 3366 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
AP3S2P59780 EHMT2-201ENST00000375528 4047 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
AP3S2P59780 CR382287.2-201ENST00000623370 1942 ntTSL 2 BASIC12.97□□□□□ -0.33
AP3S2P59780 PDE4DIP-227ENST00000529945 8824 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
AP3S2P59780 ACTR3-201ENST00000263238 6718 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
AP3S2P59780 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
AP3S2P59780 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
AP3S2P59780 LINC00887-202ENST00000414120 2880 ntTSL 3 BASIC12.97□□□□□ -0.33
AP3S2P59780 TNC-212ENST00000542877 5517 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
AP3S2P59780 NPC1-201ENST00000269228 5157 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
AP3S2P59780 NUTM2HP-201ENST00000442076 2498 ntBASIC12.97□□□□□ -0.33
AP3S2P59780 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
AP3S2P59780 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
AP3S2P59780 GTF2IRD1-202ENST00000424337 3077 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
AP3S2P59780 PNRC2-201ENST00000334351 2416 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
AP3S2P59780 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
AP3S2P59780 USP47-202ENST00000339865 7775 ntTSL 2 BASIC12.96□□□□□ -0.33
AP3S2P59780 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
AP3S2P59780 TCF23-201ENST00000296096 4882 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
AP3S2P59780 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
AP3S2P59780 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
AP3S2P59780 ZYG11A-201ENST00000371528 4469 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
AP3S2P59780 SLC44A1-202ENST00000374723 9640 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.33
AP3S2P59780 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC12.96□□□□□ -0.33
AP3S2P59780 RNF216-205ENST00000425013 5639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
AP3S2P59780 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
AP3S2P59780 CR383656.2-201ENST00000548656 2254 ntBASIC12.96□□□□□ -0.33
AP3S2P59780 DAGLB-201ENST00000297056 2897 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
AP3S2P59780 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
AP3S2P59780 TLL2-201ENST00000357947 6756 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
AP3S2P59780 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
AP3S2P59780 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.33
AP3S2P59780 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.33
AP3S2P59780 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
AP3S2P59780 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.33
AP3S2P59780 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
AP3S2P59780 B4GALT6-201ENST00000237019 2128 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
AP3S2P59780 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC12.96□□□□□ -0.33
AP3S2P59780 CRYGEP-201ENST00000412192 528 ntBASIC12.96□□□□□ -0.33
AP3S2P59780 IGLL3P-201ENST00000412472 434 ntBASIC12.96□□□□□ -0.33
AP3S2P59780 AC211429.1-201ENST00000415277 523 ntBASIC12.96□□□□□ -0.33
AP3S2P59780 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC12.96□□□□□ -0.33
AP3S2P59780 PFN2-205ENST00000461868 613 ntTSL 2 BASIC12.96□□□□□ -0.33
AP3S2P59780 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC12.96□□□□□ -0.33
AP3S2P59780 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC12.96□□□□□ -0.33
AP3S2P59780 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC12.96□□□□□ -0.33
AP3S2P59780 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC12.96□□□□□ -0.33
AP3S2P59780 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC12.96□□□□□ -0.33
AP3S2P59780 AC091304.2-201ENST00000564639 760 ntBASIC12.96□□□□□ -0.33
AP3S2P59780 AC015910.1-201ENST00000579400 975 ntBASIC12.96□□□□□ -0.33
AP3S2P59780 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC12.96□□□□□ -0.33
AP3S2P59780 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC12.96□□□□□ -0.33
AP3S2P59780 BICDL2-204ENST00000573514 3519 ntTSL 2 BASIC12.96□□□□□ -0.33
AP3S2P59780 FOXO1B-201ENST00000504678 1527 ntBASIC12.96□□□□□ -0.33
AP3S2P59780 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC12.96□□□□□ -0.33
AP3S2P59780 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
AP3S2P59780 CASKIN2-202ENST00000433559 3950 ntTSL 2 BASIC12.96□□□□□ -0.33
AP3S2P59780 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
AP3S2P59780 AC125611.4-201ENST00000553259 4166 ntTSL 2 BASIC12.96□□□□□ -0.34
AP3S2P59780 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
AP3S2P59780 ACADM-218ENST00000541113 2535 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
AP3S2P59780 SH3PXD2B-201ENST00000311601 7777 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
AP3S2P59780 TNS1-205ENST00000419504 5921 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
AP3S2P59780 TNS1-207ENST00000430930 5900 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
AP3S2P59780 FAM167A-201ENST00000284486 4094 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
AP3S2P59780 PLCD1-204ENST00000463876 2963 ntAPPRIS ALT1 TSL 2 BASIC12.96□□□□□ -0.34
AP3S2P59780 AC104129.1-202ENST00000480694 4481 ntTSL 2 BASIC12.96□□□□□ -0.34
AP3S2P59780 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC12.95□□□□□ -0.34
AP3S2P59780 TP73-203ENST00000357733 4899 ntTSL 5 BASIC12.95□□□□□ -0.34
AP3S2P59780 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 70.8 ms