Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 CACNA1C-211ENST00000399617 7482 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
CMC4P56277 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
CMC4P56277 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
CMC4P56277 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC11.2□□□□□ -0.62
CMC4P56277 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC11.2□□□□□ -0.62
CMC4P56277 STRCP1-201ENST00000509801 5328 ntBASIC11.2□□□□□ -0.62
CMC4P56277 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
CMC4P56277 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
CMC4P56277 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC11.2□□□□□ -0.62
CMC4P56277 LMBR1-201ENST00000353442 7997 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
CMC4P56277 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
CMC4P56277 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
CMC4P56277 CEMIP-202ENST00000356249 7297 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
CMC4P56277 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC11.2□□□□□ -0.62
CMC4P56277 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
CMC4P56277 ALDH7A1-201ENST00000409134 4964 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
CMC4P56277 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC11.2□□□□□ -0.62
CMC4P56277 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
CMC4P56277 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
CMC4P56277 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
CMC4P56277 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
CMC4P56277 CAND2-204ENST00000456430 4573 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
CMC4P56277 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC11.19□□□□□ -0.62
CMC4P56277 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
CMC4P56277 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
CMC4P56277 FLT4-201ENST00000261937 5857 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
CMC4P56277 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC11.19□□□□□ -0.62
CMC4P56277 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC11.19□□□□□ -0.62
CMC4P56277 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
CMC4P56277 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
CMC4P56277 CCDC88A-204ENST00000413716 9586 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
CMC4P56277 PEAR1-202ENST00000338302 4970 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
CMC4P56277 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
CMC4P56277 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC11.19□□□□□ -0.62
CMC4P56277 FKBP4P6-201ENST00000457486 1332 ntBASIC11.19□□□□□ -0.62
CMC4P56277 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
CMC4P56277 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
CMC4P56277 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC11.19□□□□□ -0.62
CMC4P56277 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
CMC4P56277 AC073347.1-201ENST00000421633 2643 ntBASIC11.19□□□□□ -0.62
CMC4P56277 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC11.19□□□□□ -0.62
CMC4P56277 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC11.19□□□□□ -0.62
CMC4P56277 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
CMC4P56277 SYNGAP1-208ENST00000629380 9862 ntAPPRIS P1 TSL 2 BASIC11.19□□□□□ -0.62
CMC4P56277 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
CMC4P56277 MGRN1-203ENST00000415496 6405 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
CMC4P56277 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC11.19□□□□□ -0.62
CMC4P56277 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
CMC4P56277 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
CMC4P56277 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC11.19□□□□□ -0.62
CMC4P56277 STX1A-203ENST00000395155 783 ntTSL 2 BASIC11.19□□□□□ -0.62
CMC4P56277 POM121L8P-201ENST00000417732 1281 ntBASIC11.19□□□□□ -0.62
CMC4P56277 FAM21FP-201ENST00000426241 1131 ntBASIC11.19□□□□□ -0.62
CMC4P56277 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
CMC4P56277 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
CMC4P56277 POM121L9P-203ENST00000441984 1285 ntBASIC11.19□□□□□ -0.62
CMC4P56277 YBX1P6-201ENST00000442962 1002 ntBASIC11.19□□□□□ -0.62
CMC4P56277 CTBP2P5-201ENST00000454986 1264 ntBASIC11.19□□□□□ -0.62
CMC4P56277 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC11.19□□□□□ -0.62
CMC4P56277 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC11.19□□□□□ -0.62
CMC4P56277 AC026434.2-201ENST00000506094 1078 ntBASIC11.19□□□□□ -0.62
CMC4P56277 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC11.19□□□□□ -0.62
CMC4P56277 IGHV3-71-201ENST00000523324 359 ntBASIC11.19□□□□□ -0.62
CMC4P56277 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC11.19□□□□□ -0.62
CMC4P56277 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC11.19□□□□□ -0.62
CMC4P56277 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC11.19□□□□□ -0.62
CMC4P56277 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
CMC4P56277 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
CMC4P56277 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC11.19□□□□□ -0.62
CMC4P56277 ZACNP1-201ENST00000612259 710 ntBASIC11.19□□□□□ -0.62
CMC4P56277 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC11.19□□□□□ -0.62
CMC4P56277 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC11.19□□□□□ -0.62
CMC4P56277 AC008687.7-202ENST00000637404 953 ntBASIC11.19□□□□□ -0.62
CMC4P56277 FAM9C-205ENST00000542843 5858 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
CMC4P56277 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
CMC4P56277 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
CMC4P56277 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC11.19□□□□□ -0.62
CMC4P56277 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
CMC4P56277 AGAP7P-201ENST00000582299 2062 ntBASIC11.19□□□□□ -0.62
CMC4P56277 AGAP14-201ENST00000624701 2060 ntBASIC11.19□□□□□ -0.62
CMC4P56277 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC11.19□□□□□ -0.62
CMC4P56277 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
CMC4P56277 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC11.19□□□□□ -0.62
CMC4P56277 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
CMC4P56277 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
CMC4P56277 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC11.19□□□□□ -0.62
CMC4P56277 SUCO-202ENST00000367723 5916 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
CMC4P56277 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
CMC4P56277 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
CMC4P56277 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
CMC4P56277 PDIA3P1-201ENST00000471856 1510 ntBASIC11.19□□□□□ -0.62
CMC4P56277 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
CMC4P56277 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
CMC4P56277 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC11.19□□□□□ -0.62
CMC4P56277 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC11.19□□□□□ -0.62
CMC4P56277 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC11.19□□□□□ -0.62
CMC4P56277 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
CMC4P56277 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
CMC4P56277 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
CMC4P56277 REV3L-207ENST00000435970 10943 ntTSL 2 BASIC11.19□□□□□ -0.62
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms