Protein–RNA interactions for Protein: P50458

LHX2, LIM/homeobox protein Lhx2, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX2P50458 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LHX2P50458 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
LHX2P50458 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LHX2P50458 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LHX2P50458 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
LHX2P50458 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
LHX2P50458 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LHX2P50458 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LHX2P50458 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LHX2P50458 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
LHX2P50458 LINC01101-201ENST00000622953 1884 ntBASIC13.38□□□□□ -0.27
LHX2P50458 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
LHX2P50458 GSN-215ENST00000545652 2428 ntTSL 2 BASIC13.38□□□□□ -0.27
LHX2P50458 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC13.38□□□□□ -0.27
LHX2P50458 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
LHX2P50458 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC13.38□□□□□ -0.27
LHX2P50458 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LHX2P50458 AC010141.1-201ENST00000411585 623 ntBASIC13.38□□□□□ -0.27
LHX2P50458 KRTAP10-13P-201ENST00000412914 571 ntBASIC13.38□□□□□ -0.27
LHX2P50458 POM121L10P-201ENST00000436994 1285 ntBASIC13.38□□□□□ -0.27
LHX2P50458 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC13.38□□□□□ -0.27
LHX2P50458 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC13.38□□□□□ -0.27
LHX2P50458 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC13.38□□□□□ -0.27
LHX2P50458 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LHX2P50458 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC13.38□□□□□ -0.27
LHX2P50458 ALG3P1-201ENST00000508806 1114 ntBASIC13.38□□□□□ -0.27
LHX2P50458 GCOM2-201ENST00000509133 1104 ntBASIC13.38□□□□□ -0.27
LHX2P50458 CD74-212ENST00000524315 584 ntTSL 5 BASIC13.38□□□□□ -0.27
LHX2P50458 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC13.38□□□□□ -0.27
LHX2P50458 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC13.38□□□□□ -0.27
LHX2P50458 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC13.38□□□□□ -0.27
LHX2P50458 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC13.38□□□□□ -0.27
LHX2P50458 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC13.38□□□□□ -0.27
LHX2P50458 AC243960.2-201ENST00000600996 747 ntBASIC13.38□□□□□ -0.27
LHX2P50458 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LHX2P50458 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
LHX2P50458 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LHX2P50458 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
LHX2P50458 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
LHX2P50458 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LHX2P50458 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC13.38□□□□□ -0.27
LHX2P50458 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC13.38□□□□□ -0.27
LHX2P50458 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC13.38□□□□□ -0.27
LHX2P50458 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LHX2P50458 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
LHX2P50458 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
LHX2P50458 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LHX2P50458 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC13.38□□□□□ -0.27
LHX2P50458 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LHX2P50458 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC13.38□□□□□ -0.27
LHX2P50458 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
LHX2P50458 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
LHX2P50458 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC13.37□□□□□ -0.27
LHX2P50458 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LHX2P50458 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
LHX2P50458 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
LHX2P50458 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC13.37□□□□□ -0.27
LHX2P50458 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC13.37□□□□□ -0.27
LHX2P50458 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC13.37□□□□□ -0.27
LHX2P50458 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
LHX2P50458 API5-203ENST00000455725 2257 ntTSL 2 BASIC13.37□□□□□ -0.27
LHX2P50458 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC13.37□□□□□ -0.27
LHX2P50458 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LHX2P50458 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
LHX2P50458 AC020907.1-201ENST00000616460 1350 ntBASIC13.37□□□□□ -0.27
LHX2P50458 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LHX2P50458 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
LHX2P50458 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
LHX2P50458 SHC1P1-201ENST00000425230 1745 ntBASIC13.37□□□□□ -0.27
LHX2P50458 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LHX2P50458 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
LHX2P50458 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC13.37□□□□□ -0.27
LHX2P50458 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC13.37□□□□□ -0.27
LHX2P50458 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC13.37□□□□□ -0.27
LHX2P50458 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
LHX2P50458 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC13.37□□□□□ -0.27
LHX2P50458 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC13.37□□□□□ -0.27
LHX2P50458 VPS18-202ENST00000558474 873 ntTSL 3 BASIC13.37□□□□□ -0.27
LHX2P50458 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
LHX2P50458 AL022328.3-201ENST00000607943 679 ntBASIC13.37□□□□□ -0.27
LHX2P50458 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC13.37□□□□□ -0.27
LHX2P50458 BX088702.1-201ENST00000610784 235 ntBASIC13.37□□□□□ -0.27
LHX2P50458 GPR182-203ENST00000622922 591 ntBASIC13.37□□□□□ -0.27
LHX2P50458 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LHX2P50458 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
LHX2P50458 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
LHX2P50458 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LHX2P50458 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
LHX2P50458 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
LHX2P50458 AC018735.1-201ENST00000437208 1502 ntBASIC13.37□□□□□ -0.27
LHX2P50458 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC13.37□□□□□ -0.27
LHX2P50458 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC13.37□□□□□ -0.27
LHX2P50458 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
LHX2P50458 HARS-202ENST00000415192 1401 ntTSL 2 BASIC13.37□□□□□ -0.27
LHX2P50458 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
LHX2P50458 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC13.37□□□□□ -0.27
LHX2P50458 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LHX2P50458 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC13.37□□□□□ -0.27
LHX2P50458 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
LHX2P50458 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC13.37□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 55.7 ms