Protein–RNA interactions for Protein: P50416

CPT1A, Carnitine O-palmitoyltransferase 1, liver isoform, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1AP50416 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC16.5■□□□□ 0.23
CPT1AP50416 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CPT1AP50416 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CPT1AP50416 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CPT1AP50416 OR9I1-201ENST00000302610 945 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
CPT1AP50416 PBDC1-201ENST00000373357 977 ntTSL 2 BASIC16.5■□□□□ 0.23
CPT1AP50416 LYPLA2-202ENST00000374502 1072 ntTSL 2 BASIC16.5■□□□□ 0.23
CPT1AP50416 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
CPT1AP50416 PTPA-215ENST00000432124 567 ntTSL 4 BASIC16.5■□□□□ 0.23
CPT1AP50416 PRKRA-211ENST00000487082 1211 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CPT1AP50416 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC16.5■□□□□ 0.23
CPT1AP50416 RBM8B-201ENST00000555532 525 ntBASIC16.5■□□□□ 0.23
CPT1AP50416 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC16.5■□□□□ 0.23
CPT1AP50416 MIR3147-201ENST00000577811 66 ntBASIC16.5■□□□□ 0.23
CPT1AP50416 COX6A1P2-201ENST00000620597 330 ntBASIC16.5■□□□□ 0.23
CPT1AP50416 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC16.5■□□□□ 0.23
CPT1AP50416 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CPT1AP50416 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
CPT1AP50416 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
CPT1AP50416 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CPT1AP50416 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC16.5■□□□□ 0.23
CPT1AP50416 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CPT1AP50416 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CPT1AP50416 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC16.5■□□□□ 0.23
CPT1AP50416 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC16.5■□□□□ 0.23
CPT1AP50416 FAM90A2P-201ENST00000511144 1395 ntBASIC16.5■□□□□ 0.23
CPT1AP50416 FAM90A25P-201ENST00000528404 1395 ntBASIC16.5■□□□□ 0.23
CPT1AP50416 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC16.5■□□□□ 0.23
CPT1AP50416 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CPT1AP50416 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CPT1AP50416 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CPT1AP50416 GPN3-201ENST00000228827 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CPT1AP50416 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CPT1AP50416 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CPT1AP50416 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CPT1AP50416 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC16.49■□□□□ 0.23
CPT1AP50416 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
CPT1AP50416 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CPT1AP50416 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CPT1AP50416 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CPT1AP50416 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
CPT1AP50416 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC16.49■□□□□ 0.23
CPT1AP50416 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CPT1AP50416 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CPT1AP50416 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CPT1AP50416 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CPT1AP50416 RPL17P11-201ENST00000417593 544 ntBASIC16.49■□□□□ 0.23
CPT1AP50416 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC16.49■□□□□ 0.23
CPT1AP50416 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC16.49■□□□□ 0.23
CPT1AP50416 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CPT1AP50416 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC16.49■□□□□ 0.23
CPT1AP50416 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC16.49■□□□□ 0.23
CPT1AP50416 TAPBP-241ENST00000489157 1299 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CPT1AP50416 AC008723.1-201ENST00000506922 207 ntBASIC16.49■□□□□ 0.23
CPT1AP50416 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC16.49■□□□□ 0.23
CPT1AP50416 NEU3-205ENST00000531619 582 ntTSL 5 BASIC16.49■□□□□ 0.23
CPT1AP50416 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
CPT1AP50416 IQSEC3P1-201ENST00000538799 536 ntBASIC16.49■□□□□ 0.23
CPT1AP50416 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC16.49■□□□□ 0.23
CPT1AP50416 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
CPT1AP50416 AC093330.1-206ENST00000582546 812 ntTSL 3 BASIC16.49■□□□□ 0.23
CPT1AP50416 EXOSC5-204ENST00000596905 826 ntTSL 2 BASIC16.49■□□□□ 0.23
CPT1AP50416 AC022001.2-201ENST00000607849 580 ntTSL 2 BASIC16.49■□□□□ 0.23
CPT1AP50416 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC16.49■□□□□ 0.23
CPT1AP50416 AC051619.9-201ENST00000623237 597 ntBASIC16.49■□□□□ 0.23
CPT1AP50416 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC16.49■□□□□ 0.23
CPT1AP50416 TMBIM7P-203ENST00000641617 1718 ntBASIC16.49■□□□□ 0.23
CPT1AP50416 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CPT1AP50416 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC16.49■□□□□ 0.23
CPT1AP50416 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
CPT1AP50416 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CPT1AP50416 AC007292.2-201ENST00000593524 1812 ntBASIC16.49■□□□□ 0.23
CPT1AP50416 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
CPT1AP50416 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CPT1AP50416 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CPT1AP50416 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CPT1AP50416 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CPT1AP50416 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CPT1AP50416 RAN-210ENST00000541630 1475 ntTSL 2 BASIC16.48■□□□□ 0.23
CPT1AP50416 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CPT1AP50416 FRMPD2B-201ENST00000431305 1347 ntBASIC16.48■□□□□ 0.23
CPT1AP50416 AC092978.1-201ENST00000474979 1309 ntTSL 5 BASIC16.48■□□□□ 0.23
CPT1AP50416 AC092978.1-202ENST00000637590 1327 ntBASIC16.48■□□□□ 0.23
CPT1AP50416 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC16.48■□□□□ 0.23
CPT1AP50416 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CPT1AP50416 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CPT1AP50416 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
CPT1AP50416 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CPT1AP50416 ARHGAP25-216ENST00000497079 1843 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CPT1AP50416 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CPT1AP50416 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CPT1AP50416 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC16.48■□□□□ 0.23
CPT1AP50416 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC16.48■□□□□ 0.23
CPT1AP50416 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
CPT1AP50416 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CPT1AP50416 RPAIN-201ENST00000327154 815 ntTSL 2 BASIC16.48■□□□□ 0.23
CPT1AP50416 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
CPT1AP50416 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CPT1AP50416 TSPO2-201ENST00000373158 718 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CPT1AP50416 GSG1L-201ENST00000380897 1173 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms