Protein–RNA interactions for Protein: P35125

USP6, Ubiquitin carboxyl-terminal hydrolase 6, humanhuman

Predictions only

Length 1,406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6P35125 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
USP6P35125 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
USP6P35125 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
USP6P35125 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC19.88■□□□□ 0.77
USP6P35125 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
USP6P35125 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
USP6P35125 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
USP6P35125 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
USP6P35125 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
USP6P35125 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC19.88■□□□□ 0.77
USP6P35125 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC19.88■□□□□ 0.77
USP6P35125 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
USP6P35125 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
USP6P35125 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
USP6P35125 PLAC8L1-201ENST00000311450 638 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
USP6P35125 AL118508.1-202ENST00000411595 709 ntTSL 2 BASIC19.88■□□□□ 0.77
USP6P35125 AL592076.1-201ENST00000424448 303 ntBASIC19.88■□□□□ 0.77
USP6P35125 AC068134.1-201ENST00000441266 481 ntTSL 3 BASIC19.88■□□□□ 0.77
USP6P35125 AC037486.1-201ENST00000523792 790 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
USP6P35125 AC129102.1-201ENST00000535755 525 ntTSL 4 BASIC19.88■□□□□ 0.77
USP6P35125 AC006435.2-201ENST00000574290 846 ntTSL 5 BASIC19.88■□□□□ 0.77
USP6P35125 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC19.88■□□□□ 0.77
USP6P35125 PCBP1-AS1-214ENST00000419542 1309 ntTSL 5 BASIC19.88■□□□□ 0.77
USP6P35125 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
USP6P35125 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
USP6P35125 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
USP6P35125 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
USP6P35125 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC19.88■□□□□ 0.77
USP6P35125 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
USP6P35125 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
USP6P35125 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC19.88■□□□□ 0.77
USP6P35125 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC19.88■□□□□ 0.77
USP6P35125 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
USP6P35125 MAP2K6-205ENST00000589647 1512 ntTSL 5 BASIC19.88■□□□□ 0.77
USP6P35125 MTMR9-202ENST00000526292 1960 ntTSL 2 BASIC19.88■□□□□ 0.77
USP6P35125 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
USP6P35125 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
USP6P35125 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
USP6P35125 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC19.87■□□□□ 0.77
USP6P35125 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
USP6P35125 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC19.87■□□□□ 0.77
USP6P35125 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
USP6P35125 C2orf70-201ENST00000329615 731 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
USP6P35125 RPS9-204ENST00000391753 709 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
USP6P35125 TP53I3-203ENST00000407482 747 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
USP6P35125 TAC3-208ENST00000441881 731 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
USP6P35125 AC079112.1-201ENST00000454972 939 ntBASIC19.87■□□□□ 0.77
USP6P35125 OSMR-AS1-202ENST00000512519 837 ntTSL 2 BASIC19.87■□□□□ 0.77
USP6P35125 SDHAF2-206ENST00000542074 835 ntTSL 2 BASIC19.87■□□□□ 0.77
USP6P35125 TSHR-205ENST00000554263 1184 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
USP6P35125 TSHR-206ENST00000554435 1089 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
USP6P35125 PRMT5-AS1-206ENST00000599580 847 ntTSL 5 BASIC19.87■□□□□ 0.77
USP6P35125 GMFG-209ENST00000600322 622 ntTSL 5 BASIC19.87■□□□□ 0.77
USP6P35125 TAC3-211ENST00000615887 1120 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
USP6P35125 RAMP3-201ENST00000242249 1323 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
USP6P35125 TMPRSS3-202ENST00000398397 1342 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
USP6P35125 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
USP6P35125 NDUFB6-203ENST00000379847 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
USP6P35125 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
USP6P35125 MEIKIN-205ENST00000616644 1438 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
USP6P35125 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
USP6P35125 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC19.87■□□□□ 0.77
USP6P35125 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
USP6P35125 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC19.87■□□□□ 0.77
USP6P35125 AL109954.1-202ENST00000564051 2148 ntBASIC19.87■□□□□ 0.77
USP6P35125 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC19.87■□□□□ 0.77
USP6P35125 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
USP6P35125 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
USP6P35125 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
USP6P35125 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
USP6P35125 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
USP6P35125 FERD3L-201ENST00000275461 640 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
USP6P35125 TMEM208-201ENST00000304800 793 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
USP6P35125 HFE-201ENST00000309234 1158 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
USP6P35125 PPIE-202ENST00000356511 1079 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
USP6P35125 CNR1-201ENST00000362094 1252 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
USP6P35125 AL137856.1-201ENST00000429398 773 ntTSL 3 BASIC19.86■□□□□ 0.77
USP6P35125 TREX1-202ENST00000444177 1200 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
USP6P35125 DUX4L50-201ENST00000455245 715 ntBASIC19.86■□□□□ 0.77
USP6P35125 RN7SL277P-201ENST00000481521 288 ntBASIC19.86■□□□□ 0.77
USP6P35125 AC027237.1-201ENST00000560942 655 ntBASIC19.86■□□□□ 0.77
USP6P35125 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
USP6P35125 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
USP6P35125 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
USP6P35125 AP002353.1-201ENST00000528257 1599 ntBASIC19.86■□□□□ 0.77
USP6P35125 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
USP6P35125 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
USP6P35125 MARK2P16-201ENST00000605714 1723 ntBASIC19.86■□□□□ 0.77
USP6P35125 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC19.86■□□□□ 0.77
USP6P35125 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC19.86■□□□□ 0.77
USP6P35125 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
USP6P35125 EVA1A-204ENST00000410071 777 ntAPPRIS P2 TSL 3 BASIC19.85■□□□□ 0.77
USP6P35125 RPL13AP19-201ENST00000434320 584 ntBASIC19.85■□□□□ 0.77
USP6P35125 AC004869.1-201ENST00000440935 540 ntTSL 4 BASIC19.85■□□□□ 0.77
USP6P35125 AC114501.1-201ENST00000445949 172 ntBASIC19.85■□□□□ 0.77
USP6P35125 AC093627.2-201ENST00000497017 568 ntTSL 4 BASIC19.85■□□□□ 0.77
USP6P35125 EIF3K-202ENST00000538434 966 ntTSL 2 BASIC19.85■□□□□ 0.77
USP6P35125 DRG2-220ENST00000583355 891 ntTSL 3 BASIC19.85■□□□□ 0.77
USP6P35125 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC19.85■□□□□ 0.77
USP6P35125 MIR6858-201ENST00000620733 67 ntBASIC19.85■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 77.8 ms