Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
HOXC8P31273 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
HOXC8P31273 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
HOXC8P31273 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HOXC8P31273 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HOXC8P31273 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC16.11■□□□□ 0.17
HOXC8P31273 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HOXC8P31273 TOMM22-201ENST00000216034 2040 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HOXC8P31273 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HOXC8P31273 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
HOXC8P31273 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
HOXC8P31273 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
HOXC8P31273 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HOXC8P31273 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
HOXC8P31273 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HOXC8P31273 IL9-201ENST00000274520 591 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HOXC8P31273 KDSR-201ENST00000326575 1024 ntTSL 2 BASIC16.11■□□□□ 0.17
HOXC8P31273 MRPL19-201ENST00000358788 693 ntTSL 5 BASIC16.11■□□□□ 0.17
HOXC8P31273 MAD2L2-206ENST00000376672 1002 ntTSL 3 BASIC16.11■□□□□ 0.17
HOXC8P31273 PCBP3-201ENST00000400304 1086 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
HOXC8P31273 SLC13A3-205ENST00000417157 876 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
HOXC8P31273 DNAJB1P1-201ENST00000429417 1024 ntBASIC16.11■□□□□ 0.17
HOXC8P31273 PCBP3-208ENST00000449640 1278 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
HOXC8P31273 IMPA1-203ENST00000449740 1180 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
HOXC8P31273 RPS6KA2-AS1-201ENST00000455390 627 ntTSL 5 BASIC16.11■□□□□ 0.17
HOXC8P31273 AP000358.1-201ENST00000456260 156 ntBASIC16.11■□□□□ 0.17
HOXC8P31273 ANXA5-210ENST00000515017 1190 ntTSL 5 BASIC16.11■□□□□ 0.17
HOXC8P31273 MCPH1-AS1-203ENST00000525186 869 ntTSL 3 BASIC16.11■□□□□ 0.17
HOXC8P31273 UBXN1-214ENST00000533000 367 ntTSL 5 BASIC16.11■□□□□ 0.17
HOXC8P31273 PPFIBP1-204ENST00000535047 875 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
HOXC8P31273 AC025154.2-201ENST00000550530 445 ntTSL 3 BASIC16.11■□□□□ 0.17
HOXC8P31273 FKBP11-212ENST00000552878 1052 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
HOXC8P31273 IFI27-215ENST00000621160 644 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
HOXC8P31273 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC16.11■□□□□ 0.17
HOXC8P31273 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HOXC8P31273 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC16.11■□□□□ 0.17
HOXC8P31273 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC16.11■□□□□ 0.17
HOXC8P31273 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
HOXC8P31273 DLG1-AS1-202ENST00000430666 1694 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
HOXC8P31273 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
HOXC8P31273 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HOXC8P31273 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HOXC8P31273 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
HOXC8P31273 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
HOXC8P31273 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
HOXC8P31273 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
HOXC8P31273 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
HOXC8P31273 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC16.1■□□□□ 0.17
HOXC8P31273 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
HOXC8P31273 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
HOXC8P31273 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
HOXC8P31273 AC090340.1-201ENST00000620778 4980 ntBASIC16.1■□□□□ 0.17
HOXC8P31273 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC16.1■□□□□ 0.17
HOXC8P31273 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
HOXC8P31273 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC16.1■□□□□ 0.17
HOXC8P31273 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
HOXC8P31273 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
HOXC8P31273 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC16.1■□□□□ 0.17
HOXC8P31273 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
HOXC8P31273 VPS29-201ENST00000360579 1091 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
HOXC8P31273 STX1A-202ENST00000395154 1022 ntTSL 3 BASIC16.1■□□□□ 0.17
HOXC8P31273 SOX9-AS1-207ENST00000446332 443 ntTSL 2 BASIC16.1■□□□□ 0.17
HOXC8P31273 UPK1B-205ENST00000497685 981 ntTSL 2 BASIC16.1■□□□□ 0.17
HOXC8P31273 APOC1P1-201ENST00000507983 630 ntTSL 4 BASIC16.1■□□□□ 0.17
HOXC8P31273 PCMTD1-207ENST00000522514 1287 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
HOXC8P31273 NDUFC2-KCTD14-202ENST00000530054 656 ntAPPRIS P3 TSL 2 BASIC16.1■□□□□ 0.17
HOXC8P31273 AL049833.2-202ENST00000556773 626 ntTSL 3 BASIC16.1■□□□□ 0.17
HOXC8P31273 TPM1-223ENST00000560445 485 ntTSL 3 BASIC16.1■□□□□ 0.17
HOXC8P31273 AC010531.4-203ENST00000561709 660 ntTSL 3 BASIC16.1■□□□□ 0.17
HOXC8P31273 AL031713.1-201ENST00000564813 661 ntBASIC16.1■□□□□ 0.17
HOXC8P31273 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC16.1■□□□□ 0.17
HOXC8P31273 LINC00923-205ENST00000615399 932 ntTSL 5 BASIC16.1■□□□□ 0.17
HOXC8P31273 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
HOXC8P31273 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
HOXC8P31273 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
HOXC8P31273 AC006504.5-208ENST00000588784 2401 ntBASIC16.1■□□□□ 0.17
HOXC8P31273 ACE-204ENST00000428043 5120 ntTSL 2 BASIC16.1■□□□□ 0.17
HOXC8P31273 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC16.1■□□□□ 0.17
HOXC8P31273 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
HOXC8P31273 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC16.1■□□□□ 0.17
HOXC8P31273 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
HOXC8P31273 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
HOXC8P31273 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
HOXC8P31273 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC16.1■□□□□ 0.17
HOXC8P31273 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC16.1■□□□□ 0.17
HOXC8P31273 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
HOXC8P31273 LINC01229-201ENST00000561510 1494 ntTSL 5 BASIC16.1■□□□□ 0.17
HOXC8P31273 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HOXC8P31273 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
HOXC8P31273 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HOXC8P31273 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC16.09■□□□□ 0.17
HOXC8P31273 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HOXC8P31273 PARN-202ENST00000420015 2360 ntTSL 2 BASIC16.09■□□□□ 0.17
HOXC8P31273 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC16.09■□□□□ 0.17
HOXC8P31273 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HOXC8P31273 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC16.09■□□□□ 0.17
HOXC8P31273 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
HOXC8P31273 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HOXC8P31273 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HOXC8P31273 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC16.09■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 54.1 ms