Protein–RNA interactions for Protein: P27695

APEX1, DNA-(apurinic or apyrimidinic site) lyase, humanhuman

Known RBP Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1P27695 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
APEX1P27695 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
APEX1P27695 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
APEX1P27695 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
APEX1P27695 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
APEX1P27695 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
APEX1P27695 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
APEX1P27695 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
APEX1P27695 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC13.69□□□□□ -0.22
APEX1P27695 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC13.69□□□□□ -0.22
APEX1P27695 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
APEX1P27695 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
APEX1P27695 ACE3P-201ENST00000423435 1973 ntBASIC13.69□□□□□ -0.22
APEX1P27695 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC13.69□□□□□ -0.22
APEX1P27695 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
APEX1P27695 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
APEX1P27695 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC13.69□□□□□ -0.22
APEX1P27695 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC13.69□□□□□ -0.22
APEX1P27695 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
APEX1P27695 UBA5-202ENST00000356232 3705 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
APEX1P27695 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
APEX1P27695 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
APEX1P27695 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
APEX1P27695 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
APEX1P27695 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
APEX1P27695 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
APEX1P27695 COPE-202ENST00000349893 948 ntTSL 2 BASIC13.69□□□□□ -0.22
APEX1P27695 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
APEX1P27695 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
APEX1P27695 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
APEX1P27695 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC13.69□□□□□ -0.22
APEX1P27695 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC13.69□□□□□ -0.22
APEX1P27695 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC13.69□□□□□ -0.22
APEX1P27695 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC13.69□□□□□ -0.22
APEX1P27695 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
APEX1P27695 SLED1-202ENST00000512051 380 ntBASIC13.69□□□□□ -0.22
APEX1P27695 AC135586.1-201ENST00000539323 574 ntBASIC13.69□□□□□ -0.22
APEX1P27695 CMC2-214ENST00000565925 640 ntTSL 5 BASIC13.69□□□□□ -0.22
APEX1P27695 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC13.69□□□□□ -0.22
APEX1P27695 PRR29-204ENST00000577953 565 ntTSL 4 BASIC13.69□□□□□ -0.22
APEX1P27695 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC13.69□□□□□ -0.22
APEX1P27695 AC027307.3-201ENST00000594262 1100 ntBASIC13.69□□□□□ -0.22
APEX1P27695 AC004233.3-201ENST00000607794 1269 ntBASIC13.69□□□□□ -0.22
APEX1P27695 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC13.69□□□□□ -0.22
APEX1P27695 AC004840.1-201ENST00000636359 365 ntBASIC13.69□□□□□ -0.22
APEX1P27695 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
APEX1P27695 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC13.69□□□□□ -0.22
APEX1P27695 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC13.69□□□□□ -0.22
APEX1P27695 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
APEX1P27695 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
APEX1P27695 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
APEX1P27695 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
APEX1P27695 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
APEX1P27695 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
APEX1P27695 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
APEX1P27695 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC13.69□□□□□ -0.22
APEX1P27695 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC13.69□□□□□ -0.22
APEX1P27695 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
APEX1P27695 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
APEX1P27695 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
APEX1P27695 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
APEX1P27695 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
APEX1P27695 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
APEX1P27695 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC13.69□□□□□ -0.22
APEX1P27695 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
APEX1P27695 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
APEX1P27695 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC13.69□□□□□ -0.22
APEX1P27695 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
APEX1P27695 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC13.68□□□□□ -0.22
APEX1P27695 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
APEX1P27695 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
APEX1P27695 SLC9A7P1-202ENST00000556476 2239 ntBASIC13.68□□□□□ -0.22
APEX1P27695 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC13.68□□□□□ -0.22
APEX1P27695 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC13.68□□□□□ -0.22
APEX1P27695 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
APEX1P27695 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
APEX1P27695 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
APEX1P27695 AC063926.2-201ENST00000623766 1308 ntBASIC13.68□□□□□ -0.22
APEX1P27695 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
APEX1P27695 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
APEX1P27695 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC13.68□□□□□ -0.22
APEX1P27695 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
APEX1P27695 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
APEX1P27695 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
APEX1P27695 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
APEX1P27695 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
APEX1P27695 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC13.68□□□□□ -0.22
APEX1P27695 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
APEX1P27695 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC13.68□□□□□ -0.22
APEX1P27695 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC13.68□□□□□ -0.22
APEX1P27695 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC13.68□□□□□ -0.22
APEX1P27695 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
APEX1P27695 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
APEX1P27695 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
APEX1P27695 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
APEX1P27695 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
APEX1P27695 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
APEX1P27695 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
APEX1P27695 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC13.68□□□□□ -0.22
APEX1P27695 MRPS18AP1-201ENST00000414458 589 ntBASIC13.68□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms