Protein–RNA interactions for Protein: O75462

CRLF1, Cytokine receptor-like factor 1, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF1O75462 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CRLF1O75462 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
CRLF1O75462 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
CRLF1O75462 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CRLF1O75462 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CRLF1O75462 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CRLF1O75462 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CRLF1O75462 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC12.12□□□□□ -0.47
CRLF1O75462 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC12.12□□□□□ -0.47
CRLF1O75462 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CRLF1O75462 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
CRLF1O75462 FRMPD2B-201ENST00000431305 1347 ntBASIC12.11□□□□□ -0.47
CRLF1O75462 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC12.11□□□□□ -0.47
CRLF1O75462 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
CRLF1O75462 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC12.11□□□□□ -0.47
CRLF1O75462 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC12.11□□□□□ -0.47
CRLF1O75462 MBLAC2-202ENST00000514906 1936 ntBASIC12.11□□□□□ -0.47
CRLF1O75462 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
CRLF1O75462 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CRLF1O75462 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CRLF1O75462 RNF216P1-203ENST00000404404 2427 ntBASIC12.11□□□□□ -0.47
CRLF1O75462 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CRLF1O75462 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CRLF1O75462 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
CRLF1O75462 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CRLF1O75462 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC12.11□□□□□ -0.47
CRLF1O75462 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC12.11□□□□□ -0.47
CRLF1O75462 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CRLF1O75462 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC12.11□□□□□ -0.47
CRLF1O75462 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
CRLF1O75462 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
CRLF1O75462 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
CRLF1O75462 OSER1-201ENST00000255174 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CRLF1O75462 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
CRLF1O75462 APBB3-205ENST00000412920 1455 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CRLF1O75462 SLC25A19-205ENST00000442286 1496 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
CRLF1O75462 CRYBB3-201ENST00000215855 867 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CRLF1O75462 RAB25-201ENST00000361084 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CRLF1O75462 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
CRLF1O75462 ZNF226-203ENST00000413984 716 ntTSL 3 BASIC12.11□□□□□ -0.47
CRLF1O75462 HIGD1A-203ENST00000430190 741 ntTSL 2 BASIC12.11□□□□□ -0.47
CRLF1O75462 AL365295.1-203ENST00000435322 566 ntTSL 4 BASIC12.11□□□□□ -0.47
CRLF1O75462 ZAP70-202ENST00000451498 1085 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
CRLF1O75462 AP000358.1-201ENST00000456260 156 ntBASIC12.11□□□□□ -0.47
CRLF1O75462 SNHG17-208ENST00000456953 546 ntTSL 3 BASIC12.11□□□□□ -0.47
CRLF1O75462 MRAS-205ENST00000474559 856 ntAPPRIS P1 TSL 3 BASIC12.11□□□□□ -0.47
CRLF1O75462 APOC1P1-201ENST00000507983 630 ntTSL 4 BASIC12.11□□□□□ -0.47
CRLF1O75462 SCARNA21-201ENST00000517026 139 ntBASIC12.11□□□□□ -0.47
CRLF1O75462 AC012158.2-201ENST00000536546 354 ntBASIC12.11□□□□□ -0.47
CRLF1O75462 SMIM6-201ENST00000556126 866 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
CRLF1O75462 DUX4L47-201ENST00000566374 394 ntBASIC12.11□□□□□ -0.47
CRLF1O75462 AC093752.3-201ENST00000567343 901 ntBASIC12.11□□□□□ -0.47
CRLF1O75462 AC093567.1-201ENST00000590649 877 ntTSL 3 BASIC12.11□□□□□ -0.47
CRLF1O75462 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
CRLF1O75462 DGAT2L7P-201ENST00000602462 744 ntBASIC12.11□□□□□ -0.47
CRLF1O75462 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
CRLF1O75462 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC12.11□□□□□ -0.47
CRLF1O75462 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CRLF1O75462 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
CRLF1O75462 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CRLF1O75462 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
CRLF1O75462 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
CRLF1O75462 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
CRLF1O75462 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CRLF1O75462 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
CRLF1O75462 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CRLF1O75462 TK2-221ENST00000620035 5060 ntTSL 2 BASIC12.11□□□□□ -0.47
CRLF1O75462 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC12.11□□□□□ -0.47
CRLF1O75462 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
CRLF1O75462 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CRLF1O75462 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CRLF1O75462 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
CRLF1O75462 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC12.11□□□□□ -0.47
CRLF1O75462 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CRLF1O75462 SCAF11-203ENST00000395453 1336 ntAPPRIS ALT2 TSL 2 BASIC12.11□□□□□ -0.47
CRLF1O75462 TMEM177-202ENST00000401466 1346 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
CRLF1O75462 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CRLF1O75462 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
CRLF1O75462 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC12.1□□□□□ -0.47
CRLF1O75462 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
CRLF1O75462 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
CRLF1O75462 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CRLF1O75462 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
CRLF1O75462 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
CRLF1O75462 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CRLF1O75462 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
CRLF1O75462 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
CRLF1O75462 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CRLF1O75462 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
CRLF1O75462 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CRLF1O75462 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CRLF1O75462 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
CRLF1O75462 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
CRLF1O75462 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC12.1□□□□□ -0.47
CRLF1O75462 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
CRLF1O75462 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
CRLF1O75462 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
CRLF1O75462 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CRLF1O75462 STK26-204ENST00000481105 1835 ntTSL 2 BASIC12.1□□□□□ -0.47
CRLF1O75462 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 63.2 ms