Protein–RNA interactions for Protein: O75396

SEC22B, Vesicle-trafficking protein SEC22b, humanhuman

Predictions only

Length 215 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22BO75396 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
SEC22BO75396 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
SEC22BO75396 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
SEC22BO75396 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC14.57□□□□□ -0.08
SEC22BO75396 AL353779.1-201ENST00000434793 351 ntBASIC14.57□□□□□ -0.08
SEC22BO75396 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC14.57□□□□□ -0.08
SEC22BO75396 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC14.57□□□□□ -0.08
SEC22BO75396 AC026410.3-201ENST00000514280 936 ntBASIC14.57□□□□□ -0.08
SEC22BO75396 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SEC22BO75396 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC14.57□□□□□ -0.08
SEC22BO75396 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC14.57□□□□□ -0.08
SEC22BO75396 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC14.57□□□□□ -0.08
SEC22BO75396 ARL16-202ENST00000570561 768 ntTSL 2 BASIC14.57□□□□□ -0.08
SEC22BO75396 WDR88-203ENST00000592765 651 ntTSL 5 BASIC14.57□□□□□ -0.08
SEC22BO75396 AL049840.4-201ENST00000602422 811 ntBASIC14.57□□□□□ -0.08
SEC22BO75396 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC14.57□□□□□ -0.08
SEC22BO75396 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
SEC22BO75396 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
SEC22BO75396 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC14.57□□□□□ -0.08
SEC22BO75396 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC14.57□□□□□ -0.08
SEC22BO75396 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
SEC22BO75396 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
SEC22BO75396 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC14.57□□□□□ -0.08
SEC22BO75396 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
SEC22BO75396 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
SEC22BO75396 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SEC22BO75396 AC018665.1-201ENST00000622927 1362 ntBASIC14.57□□□□□ -0.08
SEC22BO75396 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SEC22BO75396 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC14.57□□□□□ -0.08
SEC22BO75396 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC14.57□□□□□ -0.08
SEC22BO75396 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
SEC22BO75396 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SEC22BO75396 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC14.57□□□□□ -0.08
SEC22BO75396 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SEC22BO75396 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC14.57□□□□□ -0.08
SEC22BO75396 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC14.57□□□□□ -0.08
SEC22BO75396 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC14.57□□□□□ -0.08
SEC22BO75396 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC14.57□□□□□ -0.08
SEC22BO75396 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
SEC22BO75396 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
SEC22BO75396 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC14.56□□□□□ -0.08
SEC22BO75396 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SEC22BO75396 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
SEC22BO75396 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
SEC22BO75396 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SEC22BO75396 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC14.56□□□□□ -0.08
SEC22BO75396 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC14.56□□□□□ -0.08
SEC22BO75396 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
SEC22BO75396 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SEC22BO75396 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC14.56□□□□□ -0.08
SEC22BO75396 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SEC22BO75396 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC14.56□□□□□ -0.08
SEC22BO75396 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SEC22BO75396 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
SEC22BO75396 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SEC22BO75396 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
SEC22BO75396 AL645937.2-201ENST00000396808 931 ntBASIC14.56□□□□□ -0.08
SEC22BO75396 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
SEC22BO75396 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC14.56□□□□□ -0.08
SEC22BO75396 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SEC22BO75396 HLA-K-203ENST00000430151 1046 ntBASIC14.56□□□□□ -0.08
SEC22BO75396 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
SEC22BO75396 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
SEC22BO75396 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC14.56□□□□□ -0.08
SEC22BO75396 RN7SL399P-201ENST00000471648 279 ntBASIC14.56□□□□□ -0.08
SEC22BO75396 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC14.56□□□□□ -0.08
SEC22BO75396 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC14.56□□□□□ -0.08
SEC22BO75396 TPRX2P-201ENST00000535362 881 ntBASIC14.56□□□□□ -0.08
SEC22BO75396 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC14.56□□□□□ -0.08
SEC22BO75396 AC093512.1-201ENST00000617969 520 ntBASIC14.56□□□□□ -0.08
SEC22BO75396 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC14.56□□□□□ -0.08
SEC22BO75396 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
SEC22BO75396 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SEC22BO75396 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SEC22BO75396 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC14.56□□□□□ -0.08
SEC22BO75396 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
SEC22BO75396 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
SEC22BO75396 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
SEC22BO75396 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
SEC22BO75396 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
SEC22BO75396 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SEC22BO75396 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC14.56□□□□□ -0.08
SEC22BO75396 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC14.56□□□□□ -0.08
SEC22BO75396 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
SEC22BO75396 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SEC22BO75396 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SEC22BO75396 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
SEC22BO75396 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
SEC22BO75396 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SEC22BO75396 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
SEC22BO75396 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
SEC22BO75396 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
SEC22BO75396 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC14.56□□□□□ -0.08
SEC22BO75396 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC14.56□□□□□ -0.08
SEC22BO75396 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
SEC22BO75396 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC14.55□□□□□ -0.08
SEC22BO75396 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SEC22BO75396 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC14.55□□□□□ -0.08
SEC22BO75396 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
SEC22BO75396 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 57.2 ms