Protein–RNA interactions for Protein: O75346

ZNF253, Zinc finger protein 253, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF253O75346 EHMT2-204ENST00000395728 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
ZNF253O75346 SYBU-235ENST00000533895 3244 ntAPPRIS P4 TSL 1 (best) BASIC11.83□□□□□ -0.52
ZNF253O75346 SON-203ENST00000381679 7860 ntTSL 5 BASIC11.83□□□□□ -0.52
ZNF253O75346 ZNF536-201ENST00000355537 4945 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
ZNF253O75346 GOLGA7B-203ENST00000596005 6378 ntTSL 2 BASIC11.83□□□□□ -0.52
ZNF253O75346 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC11.83□□□□□ -0.52
ZNF253O75346 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC11.83□□□□□ -0.52
ZNF253O75346 FURIN-206ENST00000610579 4191 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
ZNF253O75346 NHSL1-202ENST00000343505 6535 ntAPPRIS P3 TSL 5 BASIC11.83□□□□□ -0.52
ZNF253O75346 AC089987.1-201ENST00000551654 2209 ntBASIC11.83□□□□□ -0.52
ZNF253O75346 BRPF1-205ENST00000433861 4304 ntTSL 2 BASIC11.83□□□□□ -0.52
ZNF253O75346 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
ZNF253O75346 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
ZNF253O75346 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
ZNF253O75346 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
ZNF253O75346 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
ZNF253O75346 PPT1-213ENST00000641319 2388 ntBASIC11.83□□□□□ -0.52
ZNF253O75346 CAP2-209ENST00000616440 2776 ntTSL 2 BASIC11.83□□□□□ -0.52
ZNF253O75346 Z82170.1-201ENST00000625081 3192 ntBASIC11.83□□□□□ -0.52
ZNF253O75346 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
ZNF253O75346 AFF3-201ENST00000317233 8135 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
ZNF253O75346 EPHB1-201ENST00000398015 4672 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
ZNF253O75346 FAM98A-201ENST00000238823 2816 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
ZNF253O75346 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
ZNF253O75346 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC11.82□□□□□ -0.52
ZNF253O75346 MEG3-213ENST00000455531 4867 ntTSL 2 BASIC11.82□□□□□ -0.52
ZNF253O75346 TRIM10-204ENST00000449742 3546 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
ZNF253O75346 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
ZNF253O75346 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC11.82□□□□□ -0.52
ZNF253O75346 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC11.82□□□□□ -0.52
ZNF253O75346 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
ZNF253O75346 RUFY1-202ENST00000393438 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
ZNF253O75346 KRT8P12-202ENST00000472924 1397 ntBASIC11.82□□□□□ -0.52
ZNF253O75346 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
ZNF253O75346 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
ZNF253O75346 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
ZNF253O75346 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
ZNF253O75346 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC11.82□□□□□ -0.52
ZNF253O75346 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
ZNF253O75346 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
ZNF253O75346 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
ZNF253O75346 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
ZNF253O75346 TONSL-201ENST00000409379 4502 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
ZNF253O75346 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
ZNF253O75346 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
ZNF253O75346 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
ZNF253O75346 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC11.82□□□□□ -0.52
ZNF253O75346 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC11.82□□□□□ -0.52
ZNF253O75346 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC11.82□□□□□ -0.52
ZNF253O75346 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
ZNF253O75346 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC11.82□□□□□ -0.52
ZNF253O75346 AC018529.1-201ENST00000613063 361 ntBASIC11.82□□□□□ -0.52
ZNF253O75346 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
ZNF253O75346 HECTD2-201ENST00000298068 4802 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
ZNF253O75346 USP35-204ENST00000530267 2419 ntTSL 2 BASIC11.82□□□□□ -0.52
ZNF253O75346 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
ZNF253O75346 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
ZNF253O75346 EPRS-201ENST00000366923 5014 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
ZNF253O75346 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
ZNF253O75346 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
ZNF253O75346 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
ZNF253O75346 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC11.82□□□□□ -0.52
ZNF253O75346 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC11.82□□□□□ -0.52
ZNF253O75346 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
ZNF253O75346 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
ZNF253O75346 MAP7-204ENST00000454590 3119 ntAPPRIS ALT2 TSL 2 BASIC11.82□□□□□ -0.52
ZNF253O75346 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC11.82□□□□□ -0.52
ZNF253O75346 FAM212B-201ENST00000357260 5980 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
ZNF253O75346 CNTNAP1-201ENST00000264638 5276 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
ZNF253O75346 NFKB1-201ENST00000226574 4085 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
ZNF253O75346 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
ZNF253O75346 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
ZNF253O75346 NAA15-202ENST00000398947 6072 ntAPPRIS ALT1 TSL 5 BASIC11.81□□□□□ -0.52
ZNF253O75346 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC11.81□□□□□ -0.52
ZNF253O75346 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC11.81□□□□□ -0.52
ZNF253O75346 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC11.81□□□□□ -0.52
ZNF253O75346 MPI-203ENST00000535694 1523 ntTSL 2 BASIC11.81□□□□□ -0.52
ZNF253O75346 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
ZNF253O75346 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC11.81□□□□□ -0.52
ZNF253O75346 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
ZNF253O75346 TBC1D9B-208ENST00000519746 2755 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
ZNF253O75346 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
ZNF253O75346 TP53I11-222ENST00000616990 3567 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
ZNF253O75346 PCK2-216ENST00000561286 2012 ntTSL 2 BASIC11.81□□□□□ -0.52
ZNF253O75346 NLRP13-201ENST00000342929 3132 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
ZNF253O75346 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
ZNF253O75346 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
ZNF253O75346 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
ZNF253O75346 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
ZNF253O75346 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
ZNF253O75346 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC11.81□□□□□ -0.52
ZNF253O75346 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
ZNF253O75346 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
ZNF253O75346 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
ZNF253O75346 AL133267.1-201ENST00000398220 340 ntBASIC11.81□□□□□ -0.52
ZNF253O75346 IMP4-203ENST00000409935 958 ntTSL 5 BASIC11.81□□□□□ -0.52
ZNF253O75346 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC11.81□□□□□ -0.52
ZNF253O75346 AC004832.2-201ENST00000426397 482 ntBASIC11.81□□□□□ -0.52
ZNF253O75346 HIST3H2BA-201ENST00000436555 524 ntBASIC11.81□□□□□ -0.52
ZNF253O75346 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC11.81□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 55.5 ms