Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC23.33■■□□□ 1.33
CHD1O14646 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
CHD1O14646 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC23.33■■□□□ 1.33
CHD1O14646 PDXDC2P-206ENST00000534700 1315 ntBASIC23.33■■□□□ 1.33
CHD1O14646 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
CHD1O14646 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC23.33■■□□□ 1.32
CHD1O14646 IFITM1-201ENST00000328221 844 ntAPPRIS P1 TSL 3 BASIC23.33■■□□□ 1.32
CHD1O14646 AIFM1-203ENST00000346424 1200 ntTSL 2 BASIC23.33■■□□□ 1.32
CHD1O14646 KRT8P6-201ENST00000399259 1207 ntBASIC23.33■■□□□ 1.32
CHD1O14646 IFITM1-202ENST00000408968 855 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
CHD1O14646 AL137244.1-201ENST00000422931 865 ntBASIC23.33■■□□□ 1.32
CHD1O14646 AC004893.2-203ENST00000482799 796 ntTSL 3 BASIC23.33■■□□□ 1.32
CHD1O14646 PRSS3P1-201ENST00000503996 742 ntBASIC23.33■■□□□ 1.32
CHD1O14646 AC005740.1-201ENST00000515639 522 ntBASIC23.33■■□□□ 1.32
CHD1O14646 AC078852.1-201ENST00000515842 441 ntTSL 3 BASIC23.33■■□□□ 1.32
CHD1O14646 AC011676.2-201ENST00000518520 584 ntTSL 2 BASIC23.33■■□□□ 1.32
CHD1O14646 VEGFA-219ENST00000518824 606 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
CHD1O14646 SRP54-AS1-204ENST00000556705 580 ntTSL 2 BASIC23.33■■□□□ 1.32
CHD1O14646 CMC2-204ENST00000562713 573 ntTSL 3 BASIC23.33■■□□□ 1.32
CHD1O14646 CMC2-209ENST00000565108 399 ntTSL 2 BASIC23.33■■□□□ 1.32
CHD1O14646 AC016586.1-201ENST00000600056 684 ntTSL 3 BASIC23.33■■□□□ 1.32
CHD1O14646 Metazoa_SRP.144-201ENST00000617007 311 ntBASIC23.33■■□□□ 1.32
CHD1O14646 FCGR3A-208ENST00000638849 873 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
CHD1O14646 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC23.33■■□□□ 1.32
CHD1O14646 KRT8P18-201ENST00000413425 1445 ntBASIC23.33■■□□□ 1.32
CHD1O14646 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC23.32■■□□□ 1.32
CHD1O14646 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
CHD1O14646 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC23.32■■□□□ 1.32
CHD1O14646 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
CHD1O14646 AC022211.2-201ENST00000585075 2527 ntBASIC23.32■■□□□ 1.32
CHD1O14646 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
CHD1O14646 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
CHD1O14646 HNF4A-206ENST00000457232 1339 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
CHD1O14646 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC23.32■■□□□ 1.32
CHD1O14646 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC23.32■■□□□ 1.32
CHD1O14646 AL365500.1-201ENST00000442783 868 ntTSL 3 BASIC23.32■■□□□ 1.32
CHD1O14646 POLR2LP1-206ENST00000444785 187 ntBASIC23.32■■□□□ 1.32
CHD1O14646 AL162377.1-202ENST00000456688 1181 ntTSL 2 BASIC23.32■■□□□ 1.32
CHD1O14646 AC011676.3-201ENST00000520606 294 ntTSL 5 BASIC23.32■■□□□ 1.32
CHD1O14646 MYMX-201ENST00000573382 817 ntAPPRIS P1 TSL 5 BASIC23.32■■□□□ 1.32
CHD1O14646 SMAD7-208ENST00000591805 1152 ntTSL 2 BASIC23.32■■□□□ 1.32
CHD1O14646 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC23.32■■□□□ 1.32
CHD1O14646 AC005865.2-202ENST00000635814 725 ntBASIC23.32■■□□□ 1.32
CHD1O14646 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
CHD1O14646 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
CHD1O14646 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
CHD1O14646 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC23.32■■□□□ 1.32
CHD1O14646 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
CHD1O14646 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC23.32■■□□□ 1.32
CHD1O14646 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
CHD1O14646 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
CHD1O14646 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
CHD1O14646 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC23.31■■□□□ 1.32
CHD1O14646 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC23.31■■□□□ 1.32
CHD1O14646 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
CHD1O14646 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC23.31■■□□□ 1.32
CHD1O14646 CYB5R2-201ENST00000299498 1254 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
CHD1O14646 LYPLA2-203ENST00000374503 868 ntTSL 2 BASIC23.31■■□□□ 1.32
CHD1O14646 AC006987.1-201ENST00000413610 527 ntBASIC23.31■■□□□ 1.32
CHD1O14646 AC147876.1-201ENST00000504408 322 ntBASIC23.31■■□□□ 1.32
CHD1O14646 AP000640.1-201ENST00000525337 879 ntTSL 2 BASIC23.31■■□□□ 1.32
CHD1O14646 RN7SL524P-201ENST00000581152 300 ntBASIC23.31■■□□□ 1.32
CHD1O14646 HKR1-220ENST00000591259 734 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
CHD1O14646 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC23.31■■□□□ 1.32
CHD1O14646 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
CHD1O14646 CLEC20A-202ENST00000623247 1491 ntAPPRIS P1 TSL 5 BASIC23.31■■□□□ 1.32
CHD1O14646 BLVRA-201ENST00000265523 1071 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
CHD1O14646 CASP2-203ENST00000392925 616 ntTSL 3 BASIC23.3■■□□□ 1.32
CHD1O14646 AL157871.1-201ENST00000555428 429 ntTSL 3 BASIC23.3■■□□□ 1.32
CHD1O14646 AL359219.1-201ENST00000556311 934 ntBASIC23.3■■□□□ 1.32
CHD1O14646 AC140658.4-201ENST00000561990 352 ntBASIC23.3■■□□□ 1.32
CHD1O14646 CNBP-205ENST00000500450 1516 ntTSL 2 BASIC23.3■■□□□ 1.32
CHD1O14646 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
CHD1O14646 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC23.3■■□□□ 1.32
CHD1O14646 SRP9-201ENST00000304786 1480 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
CHD1O14646 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC23.3■■□□□ 1.32
CHD1O14646 MAD2L1BP-201ENST00000372171 1301 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
CHD1O14646 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC23.3■■□□□ 1.32
CHD1O14646 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC23.3■■□□□ 1.32
CHD1O14646 DPEP2-202ENST00000393847 1697 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
CHD1O14646 CMTM1-201ENST00000328020 981 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
CHD1O14646 CMTM1-202ENST00000332695 624 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
CHD1O14646 MORN2-201ENST00000340556 741 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
CHD1O14646 ATXN3-201ENST00000340660 1205 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
CHD1O14646 CMTM1-205ENST00000379500 1064 ntAPPRIS P4 TSL 1 (best) BASIC23.3■■□□□ 1.32
CHD1O14646 KRTAP10-9-201ENST00000397911 1171 ntAPPRIS P2 BASIC23.3■■□□□ 1.32
CHD1O14646 AC231533.1-201ENST00000416061 925 ntTSL 3 BASIC23.3■■□□□ 1.32
CHD1O14646 KRT18P62-201ENST00000446618 1287 ntBASIC23.3■■□□□ 1.32
CHD1O14646 AC026412.1-206ENST00000502273 206 ntBASIC23.3■■□□□ 1.32
CHD1O14646 CMTM1-209ENST00000528324 749 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
CHD1O14646 CMTM1-217ENST00000533666 493 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
CHD1O14646 PMFBP1-208ENST00000537792 955 ntAPPRIS ALT2 TSL 2 BASIC23.3■■□□□ 1.32
CHD1O14646 SLC25A3-215ENST00000551265 580 ntTSL 4 BASIC23.3■■□□□ 1.32
CHD1O14646 INO80E-209ENST00000567254 625 ntTSL 2 BASIC23.3■■□□□ 1.32
CHD1O14646 SVOPL-202ENST00000419765 1523 ntAPPRIS P1 TSL 5 BASIC23.3■■□□□ 1.32
CHD1O14646 PRL-201ENST00000306482 1354 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
CHD1O14646 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
CHD1O14646 AL137077.2-201ENST00000635124 1608 ntBASIC23.3■■□□□ 1.32
CHD1O14646 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
CHD1O14646 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC23.3■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 63.7 ms