Protein–RNA interactions for Protein: O00585

CCL21, C-C motif chemokine 21, humanhuman

Predictions only

Length 134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL21O00585 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC13.16□□□□□ -0.3
CCL21O00585 AC126755.1-201ENST00000525846 6405 ntBASIC13.16□□□□□ -0.3
CCL21O00585 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CCL21O00585 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
CCL21O00585 CAP2P1-201ENST00000557743 1390 ntBASIC13.16□□□□□ -0.3
CCL21O00585 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC13.16□□□□□ -0.3
CCL21O00585 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
CCL21O00585 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC13.16□□□□□ -0.3
CCL21O00585 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC13.16□□□□□ -0.3
CCL21O00585 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CCL21O00585 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
CCL21O00585 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC13.16□□□□□ -0.3
CCL21O00585 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
CCL21O00585 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CCL21O00585 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
CCL21O00585 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC13.16□□□□□ -0.3
CCL21O00585 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
CCL21O00585 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
CCL21O00585 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC13.15□□□□□ -0.3
CCL21O00585 FRMPD2B-201ENST00000431305 1347 ntBASIC13.15□□□□□ -0.3
CCL21O00585 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC13.15□□□□□ -0.3
CCL21O00585 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
CCL21O00585 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC13.15□□□□□ -0.3
CCL21O00585 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC13.15□□□□□ -0.3
CCL21O00585 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC13.15□□□□□ -0.3
CCL21O00585 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC13.15□□□□□ -0.3
CCL21O00585 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC13.15□□□□□ -0.3
CCL21O00585 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
CCL21O00585 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CCL21O00585 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CCL21O00585 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC13.15□□□□□ -0.3
CCL21O00585 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CCL21O00585 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CCL21O00585 IL9-201ENST00000274520 591 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CCL21O00585 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CCL21O00585 RPS9-204ENST00000391753 709 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CCL21O00585 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC13.15□□□□□ -0.3
CCL21O00585 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC13.15□□□□□ -0.3
CCL21O00585 IL1R2-203ENST00000441002 1106 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CCL21O00585 IKBKB-212ENST00000519735 1166 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CCL21O00585 AP002803.1-201ENST00000528836 498 ntBASIC13.15□□□□□ -0.3
CCL21O00585 ERVK13-1-204ENST00000566343 567 ntTSL 4 BASIC13.15□□□□□ -0.3
CCL21O00585 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC13.15□□□□□ -0.3
CCL21O00585 NAT9-220ENST00000582870 896 ntTSL 5 BASIC13.15□□□□□ -0.3
CCL21O00585 GHRHR-212ENST00000611037 923 ntTSL 5 BASIC13.15□□□□□ -0.3
CCL21O00585 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
CCL21O00585 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CCL21O00585 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC13.15□□□□□ -0.3
CCL21O00585 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CCL21O00585 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC13.15□□□□□ -0.3
CCL21O00585 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
CCL21O00585 OR6A2-201ENST00000332601 1373 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
CCL21O00585 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC13.15□□□□□ -0.3
CCL21O00585 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CCL21O00585 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC13.15□□□□□ -0.3
CCL21O00585 RAN-210ENST00000541630 1475 ntTSL 2 BASIC13.15□□□□□ -0.3
CCL21O00585 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
CCL21O00585 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CCL21O00585 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CCL21O00585 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC13.15□□□□□ -0.3
CCL21O00585 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CCL21O00585 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC13.15□□□□□ -0.3
CCL21O00585 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
CCL21O00585 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC13.15□□□□□ -0.31
CCL21O00585 UPK3BL1-201ENST00000340457 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CCL21O00585 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC13.14□□□□□ -0.31
CCL21O00585 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC13.14□□□□□ -0.31
CCL21O00585 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CCL21O00585 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC13.14□□□□□ -0.31
CCL21O00585 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CCL21O00585 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CCL21O00585 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
CCL21O00585 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC13.14□□□□□ -0.31
CCL21O00585 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
CCL21O00585 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CCL21O00585 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CCL21O00585 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CCL21O00585 ANK1-203ENST00000314214 1185 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CCL21O00585 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
CCL21O00585 RPL3-202ENST00000401609 1289 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CCL21O00585 LINC01237-201ENST00000415434 573 ntTSL 4 BASIC13.14□□□□□ -0.31
CCL21O00585 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC13.14□□□□□ -0.31
CCL21O00585 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
CCL21O00585 AC098934.1-204ENST00000430114 631 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CCL21O00585 HLA-DQB2-232ENST00000437316 1214 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
CCL21O00585 SAP30L-203ENST00000440364 792 ntTSL 3 BASIC13.14□□□□□ -0.31
CCL21O00585 UBXN7-AS1-201ENST00000442941 386 ntTSL 3 BASIC13.14□□□□□ -0.31
CCL21O00585 LINC02417-201ENST00000542449 515 ntTSL 2 BASIC13.14□□□□□ -0.31
CCL21O00585 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC13.14□□□□□ -0.31
CCL21O00585 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC13.14□□□□□ -0.31
CCL21O00585 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC13.14□□□□□ -0.31
CCL21O00585 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC13.14□□□□□ -0.31
CCL21O00585 LINC01783-202ENST00000614408 828 ntBASIC13.14□□□□□ -0.31
CCL21O00585 BX284668.2-205ENST00000619677 828 ntBASIC13.14□□□□□ -0.31
CCL21O00585 AC009084.3-201ENST00000623356 437 ntBASIC13.14□□□□□ -0.31
CCL21O00585 DNAJC17-212ENST00000627802 428 ntTSL 4 BASIC13.14□□□□□ -0.31
CCL21O00585 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CCL21O00585 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC13.14□□□□□ -0.31
CCL21O00585 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CCL21O00585 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC13.14□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms