Protein–RNA interactions for Protein: O00148

DDX39A, ATP-dependent RNA helicase DDX39A, humanhuman

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39AO00148 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
DDX39AO00148 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
DDX39AO00148 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC16.91■□□□□ 0.3
DDX39AO00148 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
DDX39AO00148 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
DDX39AO00148 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
DDX39AO00148 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
DDX39AO00148 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC16.91■□□□□ 0.3
DDX39AO00148 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
DDX39AO00148 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
DDX39AO00148 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC16.91■□□□□ 0.3
DDX39AO00148 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC16.91■□□□□ 0.3
DDX39AO00148 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
DDX39AO00148 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
DDX39AO00148 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
DDX39AO00148 TISP43-201ENST00000409793 538 ntTSL 4 BASIC16.91■□□□□ 0.3
DDX39AO00148 MTX1P1-201ENST00000440904 838 ntBASIC16.91■□□□□ 0.3
DDX39AO00148 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC16.91■□□□□ 0.3
DDX39AO00148 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC16.91■□□□□ 0.3
DDX39AO00148 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
DDX39AO00148 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
DDX39AO00148 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC16.91■□□□□ 0.3
DDX39AO00148 EEF1DP1-201ENST00000585891 896 ntBASIC16.91■□□□□ 0.3
DDX39AO00148 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
DDX39AO00148 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC16.91■□□□□ 0.3
DDX39AO00148 AC023157.3-201ENST00000619086 2088 ntBASIC16.91■□□□□ 0.3
DDX39AO00148 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
DDX39AO00148 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
DDX39AO00148 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
DDX39AO00148 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
DDX39AO00148 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
DDX39AO00148 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
DDX39AO00148 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
DDX39AO00148 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
DDX39AO00148 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
DDX39AO00148 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC16.91■□□□□ 0.3
DDX39AO00148 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
DDX39AO00148 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
DDX39AO00148 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
DDX39AO00148 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC16.9■□□□□ 0.3
DDX39AO00148 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
DDX39AO00148 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC16.9■□□□□ 0.3
DDX39AO00148 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC16.9■□□□□ 0.3
DDX39AO00148 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
DDX39AO00148 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
DDX39AO00148 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
DDX39AO00148 ZBED1P1-201ENST00000502364 1930 ntBASIC16.9■□□□□ 0.3
DDX39AO00148 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
DDX39AO00148 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
DDX39AO00148 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC16.9■□□□□ 0.3
DDX39AO00148 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
DDX39AO00148 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
DDX39AO00148 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
DDX39AO00148 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
DDX39AO00148 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
DDX39AO00148 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
DDX39AO00148 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
DDX39AO00148 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
DDX39AO00148 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC16.9■□□□□ 0.3
DDX39AO00148 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
DDX39AO00148 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
DDX39AO00148 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
DDX39AO00148 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
DDX39AO00148 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
DDX39AO00148 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
DDX39AO00148 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC16.9■□□□□ 0.3
DDX39AO00148 RGS5-214ENST00000429865 754 ntTSL 3 BASIC16.9■□□□□ 0.3
DDX39AO00148 AC007969.1-201ENST00000433675 447 ntBASIC16.9■□□□□ 0.3
DDX39AO00148 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
DDX39AO00148 HIST2H2BB-201ENST00000449108 381 ntBASIC16.9■□□□□ 0.3
DDX39AO00148 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
DDX39AO00148 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC16.9■□□□□ 0.3
DDX39AO00148 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC16.9■□□□□ 0.3
DDX39AO00148 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC16.9■□□□□ 0.3
DDX39AO00148 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
DDX39AO00148 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
DDX39AO00148 RNF41-210ENST00000552244 716 ntTSL 3 BASIC16.9■□□□□ 0.3
DDX39AO00148 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC16.9■□□□□ 0.3
DDX39AO00148 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC16.9■□□□□ 0.3
DDX39AO00148 GPR182-203ENST00000622922 591 ntBASIC16.9■□□□□ 0.3
DDX39AO00148 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC16.9■□□□□ 0.3
DDX39AO00148 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
DDX39AO00148 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
DDX39AO00148 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC16.9■□□□□ 0.3
DDX39AO00148 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
DDX39AO00148 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
DDX39AO00148 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
DDX39AO00148 TCAF2P1-201ENST00000291129 2421 ntBASIC16.9■□□□□ 0.3
DDX39AO00148 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
DDX39AO00148 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
DDX39AO00148 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
DDX39AO00148 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
DDX39AO00148 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
DDX39AO00148 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
DDX39AO00148 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC16.89■□□□□ 0.3
DDX39AO00148 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
DDX39AO00148 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
DDX39AO00148 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
DDX39AO00148 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC16.89■□□□□ 0.29
DDX39AO00148 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 55 ms