Protein–RNA interactions for Protein: A6NE82

MBD3L3, Putative methyl-CpG-binding domain protein 3-like 3, humanhuman

Predicted RBP Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L3A6NE82 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
MBD3L3A6NE82 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
MBD3L3A6NE82 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
MBD3L3A6NE82 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC13.09□□□□□ -0.31
MBD3L3A6NE82 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
MBD3L3A6NE82 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
MBD3L3A6NE82 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
MBD3L3A6NE82 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC13.09□□□□□ -0.31
MBD3L3A6NE82 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
MBD3L3A6NE82 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
MBD3L3A6NE82 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC13.09□□□□□ -0.31
MBD3L3A6NE82 AC078875.1-201ENST00000431907 724 ntBASIC13.09□□□□□ -0.31
MBD3L3A6NE82 AC006335.1-201ENST00000445200 547 ntBASIC13.09□□□□□ -0.31
MBD3L3A6NE82 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
MBD3L3A6NE82 RN7SL720P-201ENST00000488178 304 ntBASIC13.09□□□□□ -0.31
MBD3L3A6NE82 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC13.09□□□□□ -0.31
MBD3L3A6NE82 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC13.09□□□□□ -0.31
MBD3L3A6NE82 SCARNA21-201ENST00000517026 139 ntBASIC13.09□□□□□ -0.31
MBD3L3A6NE82 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
MBD3L3A6NE82 PAM16-211ENST00000575848 518 ntTSL 3 BASIC13.09□□□□□ -0.31
MBD3L3A6NE82 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
MBD3L3A6NE82 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
MBD3L3A6NE82 NAP1L6-202ENST00000641404 1222 ntBASIC13.09□□□□□ -0.31
MBD3L3A6NE82 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
MBD3L3A6NE82 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
MBD3L3A6NE82 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
MBD3L3A6NE82 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC13.09□□□□□ -0.31
MBD3L3A6NE82 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC13.09□□□□□ -0.31
MBD3L3A6NE82 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
MBD3L3A6NE82 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
MBD3L3A6NE82 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC13.09□□□□□ -0.31
MBD3L3A6NE82 API5-203ENST00000455725 2257 ntTSL 2 BASIC13.09□□□□□ -0.31
MBD3L3A6NE82 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC13.09□□□□□ -0.31
MBD3L3A6NE82 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
MBD3L3A6NE82 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
MBD3L3A6NE82 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC13.09□□□□□ -0.31
MBD3L3A6NE82 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
MBD3L3A6NE82 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.31
MBD3L3A6NE82 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
MBD3L3A6NE82 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
MBD3L3A6NE82 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
MBD3L3A6NE82 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
MBD3L3A6NE82 PARN-202ENST00000420015 2360 ntTSL 2 BASIC13.08□□□□□ -0.32
MBD3L3A6NE82 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
MBD3L3A6NE82 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
MBD3L3A6NE82 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC13.08□□□□□ -0.32
MBD3L3A6NE82 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC13.08□□□□□ -0.32
MBD3L3A6NE82 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
MBD3L3A6NE82 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC13.08□□□□□ -0.32
MBD3L3A6NE82 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
MBD3L3A6NE82 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
MBD3L3A6NE82 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
MBD3L3A6NE82 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
MBD3L3A6NE82 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
MBD3L3A6NE82 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
MBD3L3A6NE82 HNRNPA1P41-201ENST00000397777 928 ntBASIC13.08□□□□□ -0.32
MBD3L3A6NE82 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
MBD3L3A6NE82 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC13.08□□□□□ -0.32
MBD3L3A6NE82 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC13.08□□□□□ -0.32
MBD3L3A6NE82 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC13.08□□□□□ -0.32
MBD3L3A6NE82 AL596276.2-201ENST00000447525 331 ntBASIC13.08□□□□□ -0.32
MBD3L3A6NE82 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC13.08□□□□□ -0.32
MBD3L3A6NE82 SUPT4H1P2-201ENST00000501248 353 ntBASIC13.08□□□□□ -0.32
MBD3L3A6NE82 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC13.08□□□□□ -0.32
MBD3L3A6NE82 CCNC-217ENST00000523985 958 ntTSL 2 BASIC13.08□□□□□ -0.32
MBD3L3A6NE82 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC13.08□□□□□ -0.32
MBD3L3A6NE82 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC13.08□□□□□ -0.32
MBD3L3A6NE82 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC13.08□□□□□ -0.32
MBD3L3A6NE82 AC015967.2-201ENST00000624092 234 ntBASIC13.08□□□□□ -0.32
MBD3L3A6NE82 AC006435.4-201ENST00000625037 234 ntBASIC13.08□□□□□ -0.32
MBD3L3A6NE82 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC13.08□□□□□ -0.32
MBD3L3A6NE82 AL356737.1-201ENST00000634391 234 ntBASIC13.08□□□□□ -0.32
MBD3L3A6NE82 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
MBD3L3A6NE82 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.32
MBD3L3A6NE82 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
MBD3L3A6NE82 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.32
MBD3L3A6NE82 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
MBD3L3A6NE82 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
MBD3L3A6NE82 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
MBD3L3A6NE82 F10-203ENST00000409306 1450 ntTSL 3 BASIC13.08□□□□□ -0.32
MBD3L3A6NE82 KRT8P19-201ENST00000551916 1455 ntBASIC13.08□□□□□ -0.32
MBD3L3A6NE82 AC092135.3-201ENST00000624151 1846 ntBASIC13.08□□□□□ -0.32
MBD3L3A6NE82 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
MBD3L3A6NE82 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
MBD3L3A6NE82 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
MBD3L3A6NE82 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC13.08□□□□□ -0.32
MBD3L3A6NE82 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
MBD3L3A6NE82 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
MBD3L3A6NE82 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
MBD3L3A6NE82 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
MBD3L3A6NE82 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC13.08□□□□□ -0.32
MBD3L3A6NE82 AL136172.1-201ENST00000598590 1394 ntBASIC13.07□□□□□ -0.32
MBD3L3A6NE82 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
MBD3L3A6NE82 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
MBD3L3A6NE82 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
MBD3L3A6NE82 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
MBD3L3A6NE82 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
MBD3L3A6NE82 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
MBD3L3A6NE82 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
MBD3L3A6NE82 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 63.6 ms