Protein–RNA interactions for Protein: A2RUR9

CCDC144A, Coiled-coil domain-containing protein 144A, humanhuman

Predictions only

Length 1,427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144AA2RUR9 MVK-214ENST00000629016 1591 ntTSL 5 BASIC21.31■■□□□ 1
CCDC144AA2RUR9 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CCDC144AA2RUR9 UBXN11-207ENST00000374223 1312 ntTSL 1 (best) BASIC21.31■■□□□ 1
CCDC144AA2RUR9 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC21.31■■□□□ 1
CCDC144AA2RUR9 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC21.31■■□□□ 1
CCDC144AA2RUR9 AC139712.1-201ENST00000378256 1875 ntBASIC21.31■■□□□ 1
CCDC144AA2RUR9 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC21.31■■□□□ 1
CCDC144AA2RUR9 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CCDC144AA2RUR9 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
CCDC144AA2RUR9 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
CCDC144AA2RUR9 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CCDC144AA2RUR9 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
CCDC144AA2RUR9 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CCDC144AA2RUR9 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC21.3■■□□□ 1
CCDC144AA2RUR9 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CCDC144AA2RUR9 C6orf52-201ENST00000259983 619 ntAPPRIS P2 TSL 5 BASIC21.3■■□□□ 1
CCDC144AA2RUR9 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC21.3■■□□□ 1
CCDC144AA2RUR9 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
CCDC144AA2RUR9 GAD1-203ENST00000375272 1252 ntTSL 1 (best) BASIC21.3■■□□□ 1
CCDC144AA2RUR9 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC21.3■■□□□ 1
CCDC144AA2RUR9 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC21.3■■□□□ 1
CCDC144AA2RUR9 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC21.3■■□□□ 1
CCDC144AA2RUR9 AC016044.1-201ENST00000560818 572 ntTSL 4 BASIC21.3■■□□□ 1
CCDC144AA2RUR9 CENPX-208ENST00000584347 799 ntTSL 2 BASIC21.3■■□□□ 1
CCDC144AA2RUR9 AC009093.10-201ENST00000641956 1442 ntBASIC21.3■■□□□ 1
CCDC144AA2RUR9 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
CCDC144AA2RUR9 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
CCDC144AA2RUR9 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
CCDC144AA2RUR9 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
CCDC144AA2RUR9 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC21.3■■□□□ 1
CCDC144AA2RUR9 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
CCDC144AA2RUR9 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC21.3■■□□□ 1
CCDC144AA2RUR9 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC21.3■■□□□ 1
CCDC144AA2RUR9 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
CCDC144AA2RUR9 ABR-203ENST00000536794 2213 ntTSL 2 BASIC21.3■■□□□ 1
CCDC144AA2RUR9 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC21.3■■□□□ 1
CCDC144AA2RUR9 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC21.3■■□□□ 1
CCDC144AA2RUR9 MPZL2-202ENST00000438295 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CCDC144AA2RUR9 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
CCDC144AA2RUR9 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC21.3■■□□□ 1
CCDC144AA2RUR9 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
CCDC144AA2RUR9 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
CCDC144AA2RUR9 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC21.3■■□□□ 1
CCDC144AA2RUR9 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CCDC144AA2RUR9 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC21.29■■□□□ 1
CCDC144AA2RUR9 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC21.29■■□□□ 1
CCDC144AA2RUR9 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC21.29■■□□□ 1
CCDC144AA2RUR9 DLGAP4-AS1-202ENST00000433238 593 ntTSL 3 BASIC21.29■■□□□ 1
CCDC144AA2RUR9 XBP1P1-201ENST00000436573 652 ntBASIC21.29■■□□□ 1
CCDC144AA2RUR9 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC21.29■■□□□ 1
CCDC144AA2RUR9 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC21.29■■□□□ 1
CCDC144AA2RUR9 AC008443.1-201ENST00000511331 1000 ntTSL 3 BASIC21.29■■□□□ 1
CCDC144AA2RUR9 CCNC-217ENST00000523985 958 ntTSL 2 BASIC21.29■■□□□ 1
CCDC144AA2RUR9 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC21.29■■□□□ 1
CCDC144AA2RUR9 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC21.29■■□□□ 1
CCDC144AA2RUR9 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
CCDC144AA2RUR9 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC21.29■■□□□ 1
CCDC144AA2RUR9 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC21.29■■□□□ 1
CCDC144AA2RUR9 AC011498.6-201ENST00000592034 510 ntTSL 5 BASIC21.29■■□□□ 1
CCDC144AA2RUR9 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC21.29■■□□□ 1
CCDC144AA2RUR9 KHSRPP1-201ENST00000427983 1768 ntBASIC21.29■■□□□ 1
CCDC144AA2RUR9 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC21.29■■□□□ 1
CCDC144AA2RUR9 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC21.29■■□□□ 1
CCDC144AA2RUR9 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CCDC144AA2RUR9 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC21.29■■□□□ 1
CCDC144AA2RUR9 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC21.29■■□□□ 1
CCDC144AA2RUR9 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC21.29■■□□□ 1
CCDC144AA2RUR9 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC21.29■■□□□ 1
CCDC144AA2RUR9 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
CCDC144AA2RUR9 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CCDC144AA2RUR9 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
CCDC144AA2RUR9 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
CCDC144AA2RUR9 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
CCDC144AA2RUR9 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CCDC144AA2RUR9 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC21.29■■□□□ 1
CCDC144AA2RUR9 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC21.29■■□□□ 1
CCDC144AA2RUR9 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC21.29■■□□□ 1
CCDC144AA2RUR9 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC21.29■■□□□ 1
CCDC144AA2RUR9 AC239868.1-201ENST00000369385 493 ntBASIC21.29■■□□□ 1
CCDC144AA2RUR9 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC21.29■■□□□ 1
CCDC144AA2RUR9 C6orf136-202ENST00000376471 614 ntTSL 3 BASIC21.29■■□□□ 1
CCDC144AA2RUR9 OR2R1P-201ENST00000441404 914 ntBASIC21.29■■□□□ 1
CCDC144AA2RUR9 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC21.29■■□□□ 1
CCDC144AA2RUR9 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC21.29■■□□□ 1
CCDC144AA2RUR9 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
CCDC144AA2RUR9 IRF3-215ENST00000596822 823 ntTSL 3 BASIC21.29■■□□□ 1
CCDC144AA2RUR9 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC21.29■■□□□ 1
CCDC144AA2RUR9 LTF-203ENST00000426532 2494 ntTSL 2 BASIC21.29■■□□□ 1
CCDC144AA2RUR9 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC21.28■■□□□ 1
CCDC144AA2RUR9 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC21.28■■□□□ 1
CCDC144AA2RUR9 LINC00554-201ENST00000564841 3011 ntBASIC21.28■■□□□ 1
CCDC144AA2RUR9 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC21.28■■□□□ 1
CCDC144AA2RUR9 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
CCDC144AA2RUR9 AC023157.3-201ENST00000619086 2088 ntBASIC21.28■■□□□ 1
CCDC144AA2RUR9 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC21.28■■□□□ 1
CCDC144AA2RUR9 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC21.28■■□□□ 1
CCDC144AA2RUR9 TOB1-AS1-201ENST00000416263 1351 ntTSL 1 (best) BASIC21.28■■□□□ 1
CCDC144AA2RUR9 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC21.28■■□□□ 1
CCDC144AA2RUR9 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC21.28■■□□□ 1
CCDC144AA2RUR9 AC092384.3-202ENST00000564646 2873 ntBASIC21.28■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 81.7 ms